RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PROCA1Q8NCQ7 364 aaPredicted RBP17.99■□□□□ 0.47
LMO4-201ENST00000370542 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
LMO4-201ENST00000370542 AATFQ9NY61 560 aaKnown RBP eCLIP17.99■□□□□ 0.47
LMO4-201ENST00000370542 TLR7Q9NYK1 1049 aaKnown RBP17.99■□□□□ 0.47
LMO4-201ENST00000370542 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.99■□□□□ 0.47
LMO4-201ENST00000370542 MGAMO43451 1857 aa17.99■□□□□ 0.47
LMO4-201ENST00000370542 FAM196BA6NMK8 535 aa17.98■□□□□ 0.47
LMO4-201ENST00000370542 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
LMO4-201ENST00000370542 FOXP4Q8IVH2 680 aaPredicted RBP17.98■□□□□ 0.47
LMO4-201ENST00000370542 ZNF280CQ8ND82 737 aa17.98■□□□□ 0.47
LMO4-201ENST00000370542 LOC285556D6RIA3 1793 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 FCGRTP55899 365 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 GADL1Q6ZQY3 521 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 CCDC84Q86UT8 332 aaPredicted RBP17.97■□□□□ 0.47
LMO4-201ENST00000370542 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 NOL10Q9BSC4 688 aaKnown RBP17.97■□□□□ 0.47
LMO4-201ENST00000370542 WDR18Q9BV38 432 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
LMO4-201ENST00000370542 DNAJC18Q9H819 358 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 PRDM6Q9NQX0 595 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 FLT1P17948 1338 aa17.97■□□□□ 0.47
LMO4-201ENST00000370542 FMNL1O95466 1100 aaPredicted RBP17.96■□□□□ 0.47
LMO4-201ENST00000370542 PTMSP20962 102 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 GRK4P32298 578 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 GJA8P48165 433 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 SPP2Q13103 211 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 MTFR1Q15390 333 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.96■□□□□ 0.47
LMO4-201ENST00000370542 TGFBRAP1Q8WUH2 860 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 MTMR10Q9NXD2 777 aa17.96■□□□□ 0.47
LMO4-201ENST00000370542 MYPNQ86TC9 1320 aa17.96■□□□□ 0.46
LMO4-201ENST00000370542 USP17L5A8MUK1 530 aa17.95■□□□□ 0.46
LMO4-201ENST00000370542 Q7L0L9 218 aa17.95■□□□□ 0.46
LMO4-201ENST00000370542 STAP2Q9UGK3 403 aa17.95■□□□□ 0.46
LMO4-201ENST00000370542 DOCK3Q8IZD9 2030 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 ASNSP08243 561 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 JAG1P78504 1218 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 PRKCZQ05513 592 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 IRF5Q13568 498 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 FAM110CQ1W6H9 321 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 MAPKAPK5Q8IW41 473 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
LMO4-201ENST00000370542 RAET1EQ8TD07 263 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 ZBTB40Q9NUA8 1239 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
LMO4-201ENST00000370542 GJB1P08034 283 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 BMP8BP34820 402 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 PXYLP1Q8TE99 480 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 ANTXR1Q9H6X2 564 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 GABRQQ9UN88 632 aa17.93■□□□□ 0.46
LMO4-201ENST00000370542 GOLGA6L3A6NEY3 463 aa17.92■□□□□ 0.46
LMO4-201ENST00000370542 CYP7A1P22680 504 aa17.92■□□□□ 0.46
LMO4-201ENST00000370542 HOXA7P31268 230 aaPredicted RBP17.92■□□□□ 0.46
LMO4-201ENST00000370542 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
LMO4-201ENST00000370542 HMGCS2P54868 508 aa17.92■□□□□ 0.46
LMO4-201ENST00000370542 BACE1P56817 501 aa17.92■□□□□ 0.46
LMO4-201ENST00000370542 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
LMO4-201ENST00000370542 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
LMO4-201ENST00000370542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
LMO4-201ENST00000370542 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
LMO4-201ENST00000370542 FLT3LGP49771 235 aa17.91■□□□□ 0.46
LMO4-201ENST00000370542 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.46
LMO4-201ENST00000370542 TATDN1Q6P1N9 297 aa17.91■□□□□ 0.46
LMO4-201ENST00000370542 AACSQ86V21 672 aa17.91■□□□□ 0.46
LMO4-201ENST00000370542 EHD4Q9H223 541 aa17.91■□□□□ 0.46
LMO4-201ENST00000370542 DDX19BQ9UMR2 479 aa17.91■□□□□ 0.46
LMO4-201ENST00000370542 C19orf81C9J6K1 198 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
LMO4-201ENST00000370542 CAPN2P17655 700 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 CLCN1P35523 988 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 LRIT3Q3SXY7 679 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 ANKRD13CQ8N6S4 541 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 MAGEB6Q8N7X4 407 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 GDF15Q99988 308 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
LMO4-201ENST00000370542 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
LMO4-201ENST00000370542 MORF4L1Q9UBU8 362 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
LMO4-201ENST00000370542 TNPO2O14787 897 aaKnown RBP17.89■□□□□ 0.45
LMO4-201ENST00000370542 EVI5O60447 810 aa17.89■□□□□ 0.45
LMO4-201ENST00000370542 ECM2O94769 699 aaPredicted RBP17.89■□□□□ 0.45
LMO4-201ENST00000370542 CCL5P13501 91 aa17.89■□□□□ 0.45
LMO4-201ENST00000370542 UBXN2AP68543 259 aa17.89■□□□□ 0.45
LMO4-201ENST00000370542 ZBTB21Q9ULJ3 1066 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms