RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 ARL1P40616 181 aaPredicted RBP11.18□□□□□ -0.62
SIM1-202ENST00000369208 SMTNP53814 917 aa11.18□□□□□ -0.62
SIM1-202ENST00000369208 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
SIM1-202ENST00000369208 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
SIM1-202ENST00000369208 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
SIM1-202ENST00000369208 SRLQ86TD4 932 aa11.18□□□□□ -0.62
SIM1-202ENST00000369208 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
SIM1-202ENST00000369208 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
SIM1-202ENST00000369208 KIF5AQ12840 1032 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 PAK2Q13177 524 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 NIM1KQ8IY84 436 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 ZNF148Q9UQR1 794 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 NUB1Q9Y5A7 615 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 FLT4P35916 1363 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 ARHGAP6O43182 974 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 CCDC63Q8NA47 563 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
SIM1-202ENST00000369208 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 SNUPNO95149 360 aaKnown RBP11.17□□□□□ -0.62
SIM1-202ENST00000369208 ESRRGP62508 458 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 GRM8O00222 908 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
SIM1-202ENST00000369208 PSD3Q9NYI0 1048 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 RNASELQ05823 741 aaKnown RBP11.17□□□□□ -0.62
SIM1-202ENST00000369208 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 BICDL2A1A5D9 508 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 PSMA7O14818 248 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
SIM1-202ENST00000369208 IQCA1LA6NCM1 817 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 USP33Q8TEY7 942 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 ABTB1Q969K4 478 aaPredicted RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 NOP56O00567 594 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 TMCC1O94876 653 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 KCNG4Q8TDN1 519 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 H7C1D1 291 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 GPR162Q16538 588 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 TUBB6Q9BUF5 446 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
SIM1-202ENST00000369208 RMI1Q9H9A7 625 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 ABCD1P33897 745 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 XAGE3Q8WTP9 111 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 RPL13P26373 211 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 MSL3Q8N5Y2 521 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
SIM1-202ENST00000369208 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
SIM1-202ENST00000369208 STXBP3O00186 592 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 NR1I2O75469 434 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 PPP1R2P41236 205 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 BASP1P80723 227 aaKnown RBP11.15□□□□□ -0.62
SIM1-202ENST00000369208 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 FCHSD1Q86WN1 690 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 GGA1Q9UJY5 639 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 PIP4K2CQ8TBX8 421 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 POLE2P56282 527 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
SIM1-202ENST00000369208 MCMDC2Q4G0Z9 681 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 TXNDC16Q9P2K2 825 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
SIM1-202ENST00000369208 PPP2R5EQ16537 467 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 C17orf50Q8WW18 174 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
SIM1-202ENST00000369208 ZNF75DP51815 510 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
SIM1-202ENST00000369208 IRS4O14654 1257 aaPredicted RBP11.15□□□□□ -0.63
SIM1-202ENST00000369208 RPSAP08865 295 aaKnown RBP11.15□□□□□ -0.63
SIM1-202ENST00000369208 PUS7Q96PZ0 661 aaKnown RBP11.15□□□□□ -0.63
SIM1-202ENST00000369208 SNRKQ9NRH2 765 aa11.15□□□□□ -0.63
SIM1-202ENST00000369208 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.63
SIM1-202ENST00000369208 CFAP73A6NFT4 308 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 F6X3S4 739 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 RHOXF2BP0C7M4 288 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 GNGT1P63211 74 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 RHOXF2Q9BQY4 288 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 TXLNGQ9NUQ3 528 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 DNM2P50570 870 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 PRDM4Q9UKN5 801 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
SIM1-202ENST00000369208 RNF40O75150 1001 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms