RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 DPEP1P16444 411 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 NT5C2P49902 561 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 PTPAQ15257 358 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 SEC23AQ15436 765 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
ECM1-202ENST00000369047 MAP3K14Q99558 947 aa15.2■□□□□ 0.02
ECM1-202ENST00000369047 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 CUTAO60888 179 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 CALM1P0DP23 149 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 CALM2P0DP24 149 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 CALM3P0DP25 149 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 SPTY2D1Q68D10 685 aaPredicted RBP15.19■□□□□ 0.02
ECM1-202ENST00000369047 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
ECM1-202ENST00000369047 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 NOSTRINQ8IVI9 506 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 DRC7Q8IY82 874 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
ECM1-202ENST00000369047 NSUN4Q96CB9 384 aaKnown RBP15.19■□□□□ 0.02
ECM1-202ENST00000369047 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 CRY2Q49AN0 593 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 KIAA1524Q8TCG1 905 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 ATP8A2Q9NTI2 1148 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 WDHD1O75717 1129 aaPredicted RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 SRGNP10124 158 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 PFKFB1P16118 471 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 XBP1P17861 261 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 ELOA2Q8IYF1 753 aaPredicted RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 CCDC24Q8N4L8 307 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 MPNDQ8N594 471 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
ECM1-202ENST00000369047 HPSEQ9Y251 543 aa15.18■□□□□ 0.02
ECM1-202ENST00000369047 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
ECM1-202ENST00000369047 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
ECM1-202ENST00000369047 TNKSO95271 1327 aa15.17■□□□□ 0.02
ECM1-202ENST00000369047 WTIPA6NIX2 430 aaPredicted RBP15.17■□□□□ 0.02
ECM1-202ENST00000369047 SYKP43405 635 aa15.17■□□□□ 0.02
ECM1-202ENST00000369047 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
ECM1-202ENST00000369047 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
ECM1-202ENST00000369047 DHX40Q8IX18 779 aaKnown RBP15.17■□□□□ 0.02
ECM1-202ENST00000369047 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
ECM1-202ENST00000369047 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.02
ECM1-202ENST00000369047 ORC4O43929 436 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CHRNA5P30532 468 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 NLRP12P59046 1061 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 AKAP17AQ02040 695 aaKnown RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 MECOMQ03112 1051 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 RESP18Q5W5W9 173 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CATIPQ7Z7H3 387 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CRAMP1Q96RY5 1269 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 BRCA1P38398 1863 aaKnown RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 NEMFO60524 1076 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 MARCKSP29966 332 aaPredicted RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CCDC186Q7Z3E2 898 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 DIS3L2Q8IYB7 885 aaKnown RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 ZNF384Q8TF68 577 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CEP131Q9UPN4 1083 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 LEMD3Q9Y2U8 911 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
ECM1-202ENST00000369047 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
ECM1-202ENST00000369047 CCDC88AQ3V6T2 1871 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 IFIT1BQ5T764 474 aaKnown RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 TMC4Q7Z404 712 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 ENAHQ8N8S7 591 aaPredicted RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 SMTNL1A8MU46 457 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 BTBD18B2RXH4 712 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 PRPF3O43395 683 aaKnown RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 DDAH1O94760 285 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 TPM4P67936 248 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 SHC4Q6S5L8 630 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 PRIMPOLQ96LW4 560 aa15.15■□□□□ 0.02
ECM1-202ENST00000369047 ARPP21Q9UBL0 812 aaPredicted RBP15.15■□□□□ 0.02
ECM1-202ENST00000369047 MAST2Q6P0Q8 1798 aa15.14■□□□□ 0.01
ECM1-202ENST00000369047 ARFGEF1Q9Y6D6 1849 aa15.14■□□□□ 0.01
ECM1-202ENST00000369047 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
ECM1-202ENST00000369047 USP17L21D6R901 530 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms