RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RCAN1P53805 252 aa27.98■■■□□ 2.07
SNX3-203ENST00000368979 TCP10Q12799 353 aa27.98■■■□□ 2.07
SNX3-203ENST00000368979 SH3BP5LQ7L8J4 393 aa27.98■■■□□ 2.07
SNX3-203ENST00000368979 MYOZ2Q9NPC6 264 aa27.98■■■□□ 2.07
SNX3-203ENST00000368979 TCP11L1Q9NUJ3 509 aa27.98■■■□□ 2.07
SNX3-203ENST00000368979 SHTN1A0MZ66 631 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 JAK2O60674 1132 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 METAP2P50579 478 aaKnown RBP eCLIP27.97■■■□□ 2.07
SNX3-203ENST00000368979 RAB11FIP4Q86YS3 637 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 SWAP70Q9UH65 585 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 ZDHHC9Q9Y397 364 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 DDTLA6NHG4 134 aaPredicted RBP27.97■■■□□ 2.07
SNX3-203ENST00000368979 NMT2O60551 498 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 BRD1O95696 1058 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 IFIT1BQ5T764 474 aaKnown RBP27.97■■■□□ 2.07
SNX3-203ENST00000368979 MICU3Q86XE3 530 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 IL17RBQ9NRM6 502 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 TAOK2Q9UL54 1235 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 GJA3Q9Y6H8 435 aa27.97■■■□□ 2.07
SNX3-203ENST00000368979 MYH8P13535 1937 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 CLRN2A0PK11 232 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 DHX16O60231 1041 aaKnown RBP27.96■■■□□ 2.07
SNX3-203ENST00000368979 TSPY3P0CV98 308 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 TSPY8P0CW00 308 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 SYNE3Q6ZMZ3 975 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 ZNF654Q8IZM8 581 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 TNPO1Q92973 898 aaKnown RBP27.96■■■□□ 2.07
SNX3-203ENST00000368979 MYL10Q9BUA6 226 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 PLIN4Q96Q06 1357 aa27.96■■■□□ 2.07
SNX3-203ENST00000368979 PTPDC1A2A3K4 754 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 GOLGA8AA7E2F4 631 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 WNT10BO00744 389 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 CCDC178Q5BJE1 867 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 FKBP1CQ5VVH2 108 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 RCSD1Q6JBY9 416 aa27.95■■■□□ 2.06
SNX3-203ENST00000368979 RXRAP19793 462 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 SYT1P21579 422 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 HMGN5P82970 282 aaKnown RBP27.94■■■□□ 2.06
SNX3-203ENST00000368979 DGKHQ86XP1 1220 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 MICALL2Q8IY33 904 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 NEDD1Q8NHV4 660 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 ANKS1AQ92625 1134 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 PI4KBQ9UBF8 816 aa27.94■■■□□ 2.06
SNX3-203ENST00000368979 SHMT1P34896 483 aa27.93■■■□□ 2.06
SNX3-203ENST00000368979 FAM217BQ9NTX9 383 aaPredicted RBP27.93■■■□□ 2.06
SNX3-203ENST00000368979 CNTNAP1P78357 1384 aa27.93■■■□□ 2.06
SNX3-203ENST00000368979 TCP10L2B9ZVM9 353 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 MYO1BO43795 1136 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 CDC27P30260 824 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 NBPF9Q3BBW0 867 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 METTL16Q86W50 562 aaKnown RBP27.92■■■□□ 2.06
SNX3-203ENST00000368979 DNAJC18Q9H819 358 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 CNOT7Q9UIV1 285 aaKnown RBP27.92■■■□□ 2.06
SNX3-203ENST00000368979 WDR33Q9C0J8 1336 aaKnown RBP27.92■■■□□ 2.06
SNX3-203ENST00000368979 STX6O43752 255 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 ZSCAN29Q8IWY8 852 aaPredicted RBP27.92■■■□□ 2.06
SNX3-203ENST00000368979 GPC2Q8N158 579 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 FAM151AQ8WW52 585 aa27.92■■■□□ 2.06
SNX3-203ENST00000368979 GREB1LQ9C091 1923 aaPredicted RBP27.91■■■□□ 2.06
SNX3-203ENST00000368979 CPLX1O14810 134 aa27.91■■■□□ 2.06
SNX3-203ENST00000368979 DDAH1O94760 285 aa27.91■■■□□ 2.06
SNX3-203ENST00000368979 PDIA4P13667 645 aaKnown RBP27.91■■■□□ 2.06
SNX3-203ENST00000368979 PDCP20941 246 aa27.91■■■□□ 2.06
SNX3-203ENST00000368979 ADD1P35611 737 aaKnown RBP27.91■■■□□ 2.06
SNX3-203ENST00000368979 FOXP4Q8IVH2 680 aaPredicted RBP27.91■■■□□ 2.06
SNX3-203ENST00000368979 DDX11Q96FC9 970 aa27.91■■■□□ 2.06
SNX3-203ENST00000368979 EGFRP00533 1210 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 NTRK3Q16288 839 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 CATIPQ7Z7H3 387 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 FAM83AQ86UY5 434 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 CCDC144CPQ8IYA2 1237 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 VEZTQ9HBM0 779 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 RNF181Q9P0P0 153 aa27.9■■■□□ 2.06
SNX3-203ENST00000368979 NOVP48745 357 aa27.89■■■□□ 2.06
SNX3-203ENST00000368979 TROAPQ12815 778 aa27.89■■■□□ 2.06
SNX3-203ENST00000368979 NFKBIBQ15653 356 aa27.89■■■□□ 2.06
SNX3-203ENST00000368979 RTN1Q16799 776 aa27.89■■■□□ 2.06
SNX3-203ENST00000368979 LARP1BQ659C4 914 aaKnown RBP27.89■■■□□ 2.06
SNX3-203ENST00000368979 CRACR2BQ8N4Y2 399 aaPredicted RBP27.89■■■□□ 2.06
SNX3-203ENST00000368979 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.89■■■□□ 2.06
SNX3-203ENST00000368979 CALM1P0DP23 149 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 CALM2P0DP24 149 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 CALM3P0DP25 149 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 FDPSP14324 419 aaKnown RBP27.88■■■□□ 2.05
SNX3-203ENST00000368979 AKR1B1P15121 316 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 PPP2R5BQ15173 497 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 CLEC17AQ6ZS10 378 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 FANCBQ8NB91 859 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 NUP133Q8WUM0 1156 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 MTMR6Q9Y217 621 aa27.88■■■□□ 2.05
SNX3-203ENST00000368979 IGKV6D-41A0A0C4DH26 115 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 CDKL5O76039 1030 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 SLURP2P0DP57 97 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 CPLX2Q6PUV4 134 aaKnown RBP27.87■■■□□ 2.05
SNX3-203ENST00000368979 SAMD7Q7Z3H4 446 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 FAM184AQ8NB25 1140 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 KIF3AQ9Y496 699 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 CCDC196A0A1B0GTZ2 297 aa27.87■■■□□ 2.05
SNX3-203ENST00000368979 ZSCAN22P10073 491 aaPredicted RBP27.87■■■□□ 2.05
SNX3-203ENST00000368979 KIF4BQ2VIQ3 1234 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms