RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
TPM3-211ENST00000368531 CAP2P40123 477 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 PDE4BQ07343 736 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
TPM3-211ENST00000368531 DEFB115Q30KQ5 88 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
TPM3-211ENST00000368531 TBC1D10CQ8IV04 446 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
TPM3-211ENST00000368531 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 ANAPC4Q9UJX5 808 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 ROBO3Q96MS0 1386 aa16.5■□□□□ 0.23
TPM3-211ENST00000368531 GH2P01242 217 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 AKR1B1P15121 316 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 ABCB5Q2M3G0 1257 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 C8orf34Q49A92 452 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 SCYL3Q8IZE3 742 aa16.49■□□□□ 0.23
TPM3-211ENST00000368531 SEC24BO95487 1268 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 CYP21A2P08686 494 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 RASA1P20936 1047 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
TPM3-211ENST00000368531 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
TPM3-211ENST00000368531 SLC27A2O14975 620 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 RANBP6O60518 1105 aaKnown RBP16.47■□□□□ 0.23
TPM3-211ENST00000368531 SEPT2Q15019 361 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
TPM3-211ENST00000368531 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM3-211ENST00000368531 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
TPM3-211ENST00000368531 NEDD4P46934 1319 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 RASSF10A6NK89 507 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 B4E1Z4 1266 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 ASNSP08243 561 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 PTPRAP18433 802 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 TFAP4Q01664 338 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 WNK4Q96J92 1243 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
TPM3-211ENST00000368531 PHIPQ8WWQ0 1821 aa16.46■□□□□ 0.23
TPM3-211ENST00000368531 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 USP17L5A8MUK1 530 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 GJA5P36382 358 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 HHIPL1Q96JK4 782 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
TPM3-211ENST00000368531 E7EWF7 191 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 ORC4O43929 436 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 FGRP09769 529 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 GUCY1A2P33402 732 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
TPM3-211ENST00000368531 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
TPM3-211ENST00000368531 AOC2O75106 756 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 KDM4AO75164 1064 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 SLC10A3P09131 477 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 PCP11498 1178 aaKnown RBP16.43■□□□□ 0.22
TPM3-211ENST00000368531 HSPA4P34932 840 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 ECE1P42892 770 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 VEGFBP49765 207 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 PPATQ06203 517 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 TRDNQ13061 729 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 SPP2Q13103 211 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 ESR2Q92731 530 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
TPM3-211ENST00000368531 KRT23Q9C075 422 aa16.43■□□□□ 0.22
TPM3-211ENST00000368531 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
TPM3-211ENST00000368531 IRF6O14896 467 aa16.42■□□□□ 0.22
TPM3-211ENST00000368531 NMT2O60551 498 aa16.42■□□□□ 0.22
TPM3-211ENST00000368531 MCCP23508 829 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms