RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 V9GYY5 206 aaPredicted RBP20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 PLEKHA8P1O95397 391 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 EARS2Q5JPH6 523 aaKnown RBP20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 JAG2Q9Y219 1238 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 COL1A1P02452 1464 aaPredicted RBP20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 SPDYE4A6NLX3 237 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 POSTNQ15063 836 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 IFIT1BQ5T764 474 aaKnown RBP20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 NID2Q14112 1375 aa20.76■□□□□ 0.91
UBQLN4-201ENST00000368309 USP17L12C9JPN9 530 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 USP17L21D6R901 530 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 CSRNP2Q9H175 543 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 MAN1B1Q9UKM7 699 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 ARAP2Q8WZ64 1704 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 SF3B3Q15393 1217 aaKnown RBP20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 PKN1Q16512 942 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 CLEC4GQ6UXB4 293 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 MTA3Q9BTC8 594 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 DOCK2Q92608 1830 aa20.75■□□□□ 0.91
UBQLN4-201ENST00000368309 BCL9LQ86UU0 1499 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 TBC1D9BQ66K14 1250 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 PPP1R13BQ96KQ4 1090 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 ZNF215Q9UL58 517 aaPredicted RBP20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 NMT2O60551 498 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 PTF1AQ7RTS3 328 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 KIF18AQ8NI77 898 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 RNF26Q9BY78 433 aaPredicted RBP20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 SPATA31A5Q5VU36 1347 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 CATIPQ7Z7H3 387 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 SPATA31A7Q8IWB4 1347 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 TRMT44Q8IYL2 757 aaKnown RBP20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 ZMYND15Q9H091 742 aa20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 HOOK1Q9UJC3 728 aaKnown RBP20.74■□□□□ 0.91
UBQLN4-201ENST00000368309 FMR1Q06787 632 aaKnown RBP eCLIP20.73■□□□□ 0.911e-8■■■■■ 79.6
UBQLN4-201ENST00000368309 NOM1Q5C9Z4 860 aaKnown RBP20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 SMARCC1Q92922 1105 aaPredicted RBP20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 AATFQ9NY61 560 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 TAF1P21675 1872 aa20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 CHD4Q14839 1912 aa20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 IQCA1Q86XH1 822 aa20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 ECM29Q5VYK3 1845 aa20.73■□□□□ 0.91
UBQLN4-201ENST00000368309 FAM47AQ5JRC9 791 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 EPSTI1Q96J88 318 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 ROBO1Q9Y6N7 1651 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 WNT7AO00755 349 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 FAM98CQ17RN3 349 aaKnown RBP20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 FUT2Q10981 343 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 SYT10Q6XYQ8 523 aa20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
UBQLN4-201ENST00000368309 CBFA2T2O43439 604 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 NRDCO43847 1150 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 XBP1P17861 261 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 RCAN1P53805 252 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 MECOMQ03112 1051 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 DHX58Q96C10 678 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 CEP131Q9UPN4 1083 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 NFE2L3Q9Y4A8 694 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 TRIM75PA6NK02 468 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 TOP1P11387 765 aaKnown RBP20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 CDK11BP21127 795 aaKnown RBP20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 TROAPQ12815 778 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 KCND1Q9NSA2 647 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 TIAM2Q8IVF5 1701 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 CASP1P29466 404 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 RPS8P62241 208 aaKnown RBP20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 NSUN4Q96CB9 384 aaKnown RBP20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 BAZ2BQ9UIF8 2168 aaKnown RBP20.71■□□□□ 0.91
UBQLN4-201ENST00000368309 NPHP1O15259 732 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 AFMP43652 599 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 VSTM4Q8IW00 320 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 PLCH1Q4KWH8 1693 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 ACTN4O43707 911 aaKnown RBP20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 CYP2D6P10635 497 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 PRDX5P30044 214 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 KRT2P35908 639 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 ZNF174Q15697 407 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 PHF20Q9BVI0 1012 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 A0A087X0B3 334 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 FBXO33Q7Z6M2 555 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 ZNF579Q8NAF0 562 aaKnown RBP20.7■□□□□ 0.9
UBQLN4-201ENST00000368309 PRPF3O43395 683 aaKnown RBP20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 SARSP49591 514 aaKnown RBP20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 MED15Q96RN5 788 aa20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 PSDA5PKW4 1024 aaPredicted RBP20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 PPP2R5BQ15173 497 aa20.69■□□□□ 0.9
UBQLN4-201ENST00000368309 MORC3Q14149 939 aa20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 SAMSN1Q9NSI8 373 aaKnown RBP20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 PHLPP1O60346 1717 aa20.68■□□□□ 0.9
UBQLN4-201ENST00000368309 VEGFAP15692 232 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms