RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 WTIPA6NIX2 430 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 SOBPA7XYQ1 873 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 ADM5C9JUS6 153 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 E9PSI1 815 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 FYB1O15117 783 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 PTSQ03393 145 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 CXCL9Q07325 125 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 C1orf53Q5VUE5 145 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 HDGFL2Q7Z4V5 671 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 RTKN2Q8IZC4 609 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 XIRP2A4UGR9 3374 aa8.21□□□□□ -1.1
ECHDC1-202ENST00000368289 EML1O00423 815 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 F11P03951 625 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 PDE3AQ14432 1141 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 HIF1AQ16665 826 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 DEFB123Q8N688 67 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 EXOC6Q8TAG9 804 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 ZDHHC1Q8WTX9 485 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 SNX27Q96L92 541 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 FLT4P35916 1363 aa8.2□□□□□ -1.1
ECHDC1-202ENST00000368289 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 H7C1W4 665 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 PPM1GO15355 546 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 FKTNO75072 461 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CT47B1P0C2W7 299 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 NPR1P16066 1061 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 TM4SF4P48230 202 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CABP4P57796 275 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 MOB2Q70IA6 237 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 JDP2Q8WYK2 163 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 GMCL1Q96IK5 515 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 ZNF333Q96JL9 665 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 GAS2L1Q99501 681 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CFHR5Q9BXR6 569 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 PTPN22Q9Y2R2 807 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 ANKRD26Q9UPS8 1709 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 WDFY4Q6ZS81 3184 aa8.19□□□□□ -1.1
ECHDC1-202ENST00000368289 CFAP54Q96N23 3096 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 MSX1P28360 303 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 UBE2Q1Q7Z7E8 422 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 WDR63Q8IWG1 891 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 ALDH16A1Q8IZ83 802 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 POLR2AP24928 1970 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 MRC1P22897 1456 aa8.18□□□□□ -1.1
ECHDC1-202ENST00000368289 MUC6Q6W4X9 2439 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 KCNA1Q09470 495 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 CNGB1Q14028 1251 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 LBRQ14739 615 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 EFHC2Q5JST6 749 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 CCDC155Q8N6L0 562 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 RHPN1Q8TCX5 695 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 PHACTR1Q9C0D0 580 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 PNNQ9H307 717 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 ASTN2O75129 1339 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
ECHDC1-202ENST00000368289 CAMTA2O94983 1202 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 TXLNAP40222 546 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 RTN1Q16799 776 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 DNAH12Q6ZR08 3092 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 NPAS3Q8IXF0 933 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 MYO19Q96H55 970 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 PODXL2Q9NZ53 605 aa8.16□□□□□ -1.1
ECHDC1-202ENST00000368289 CACNA1GO43497 2377 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 A0A1W2PPC1 479 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 SH3PXD2AQ5TCZ1 1133 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 PHLDB3Q6NSJ2 640 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 GUCD1Q96NT3 240 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 CRBNQ96SW2 442 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 STAP2Q9UGK3 403 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms