RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 UBN2Q6ZU65 1347 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 SYNRGQ9UMZ2 1314 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 MACROD2A1Z1Q3 448 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 TTF1Q15361 905 aaPredicted RBP12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 CENPHQ9H3R5 247 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 SEC31BQ9NQW1 1179 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 CEP131Q9UPN4 1083 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 JCADQ9P266 1359 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 SASH3O75995 380 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 CYP2C19P33261 490 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 FEZ2Q9UHY8 353 aaPredicted RBP12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
NECTIN4-201ENST00000368012 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 SLC5A1P13866 664 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 ADD2P35612 726 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 MLKLQ8NB16 471 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 RGPD2P0DJD1 1756 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 SRGAP2O75044 1071 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 BMP6P22004 513 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 TTC19Q6DKK2 380 aaPredicted RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 FAN1Q9Y2M0 1017 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 ZPR1O75312 459 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 CASP7P55210 303 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 RILPL1Q5EBL4 403 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 RESP18Q5W5W9 173 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
NECTIN4-201ENST00000368012 MARCH6O60337 910 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 TC2NQ8N9U0 490 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 TRIM10Q9UDY6 481 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 STX10O60499 249 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 POLD4Q9HCU8 107 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 ABCB6Q9NP58 842 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 RAD9BQ6WBX8 426 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 KRT23Q9C075 422 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
NECTIN4-201ENST00000368012 PPP6R2O75170 966 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 ABL1P00519 1130 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 TRIM21P19474 475 aaKnown RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 IQCA1Q86XH1 822 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 LTN1O94822 1766 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 IGHMBP2P38935 993 aaKnown RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 PTGDRQ13258 359 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 PDE8BO95263 885 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 TXLNAP40222 546 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 GYG1P46976 350 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 STRBPQ96SI9 672 aaKnown RBP12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
NECTIN4-201ENST00000368012 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 FOXP2O15409 715 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 DEXIO95424 95 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 MMP1P03956 469 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 PTPAQ15257 358 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 CCDC148Q8NFR7 591 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms