RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 PPP2R2CQ9Y2T4 447 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 ERBB3P21860 1342 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 HNRNPH1P31943 449 aaKnown RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 CAPRIN2Q6IMN6 1127 aaKnown RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 MORC4Q8TE76 937 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
PRKN-206ENST00000366898 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 KDRP35968 1356 aa13.15□□□□□ -0.31
PRKN-206ENST00000366898 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
PRKN-206ENST00000366898 MYZAPP0CAP1 466 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 hCG_2014768A0A024R1R8 64 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 MYL5Q02045 173 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 DBNLQ9UJU6 430 aaKnown RBP13.14□□□□□ -0.31
PRKN-206ENST00000366898 AOX1Q06278 1338 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 HIP1RO75146 1068 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 STARD3NLO95772 234 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 TSNAXIP1Q2TAA8 658 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 DHX58Q96C10 678 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
PRKN-206ENST00000366898 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
PRKN-206ENST00000366898 RXRAP19793 462 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 PAX7P23759 505 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 DAAM2Q86T65 1068 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 ADCY9O60503 1353 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 RGS12O14924 1447 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
PRKN-206ENST00000366898 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 ABCF2Q9UG63 623 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 A6NNZ2 444 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
PRKN-206ENST00000366898 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
PRKN-206ENST00000366898 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
PRKN-206ENST00000366898 TECPR2O15040 1411 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
PRKN-206ENST00000366898 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 KRT86O43790 486 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 IDEP14735 1019 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 ERICH2A1L162 156 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
PRKN-206ENST00000366898 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 AFMP43652 599 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
PRKN-206ENST00000366898 SESN3P58005 492 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 STIM2Q9P246 746 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CYP27B1O15528 508 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 DDIT3P35638 169 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CORO7P57737 925 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 KIF5AQ12840 1032 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 CUL4AQ13619 759 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 IFT74Q96LB3 600 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
PRKN-206ENST00000366898 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
PRKN-206ENST00000366898 PDCLQ13371 301 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKN-206ENST00000366898 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 IL2RBP14784 551 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 RFC1P35251 1148 aaPredicted RBP13.11□□□□□ -0.31
PRKN-206ENST00000366898 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
PRKN-206ENST00000366898 TACC1O75410 805 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
PRKN-206ENST00000366898 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKN-206ENST00000366898 GUCY2FP51841 1108 aa13.1□□□□□ -0.31
PRKN-206ENST00000366898 RWDD2BP57060 319 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms