RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 CFHR5Q9BXR6 569 aa23.89■■□□□ 1.41
H3F3A-204ENST00000366816 A0A0G2JLL6 359 aaPredicted RBP23.88■■□□□ 1.41
H3F3A-204ENST00000366816 USP17L5A8MUK1 530 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 GH2P01242 217 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 GABPAQ06546 454 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 TAF1CQ15572 869 aaPredicted RBP23.88■■□□□ 1.41
H3F3A-204ENST00000366816 C12orf60Q5U649 245 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 CTR9Q6PD62 1173 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 CCDC129Q6ZRS4 1044 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 PRRT2Q7Z6L0 340 aaPredicted RBP23.88■■□□□ 1.41
H3F3A-204ENST00000366816 SLC44A5Q8NCS7 719 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 DDRGK1Q96HY6 314 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 ZBTB21Q9ULJ3 1066 aa23.88■■□□□ 1.41
H3F3A-204ENST00000366816 BAZ2AQ9UIF9 1905 aaKnown RBP23.87■■□□□ 1.41
H3F3A-204ENST00000366816 ASNSP08243 561 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
H3F3A-204ENST00000366816 GPAT2Q6NUI2 795 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 GADL1Q6ZQY3 521 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 ZNF280CQ8ND82 737 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 PHIPQ8WWQ0 1821 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 ATAD5Q96QE3 1844 aa23.87■■□□□ 1.41
H3F3A-204ENST00000366816 PDHXO00330 501 aa23.86■■□□□ 1.41
H3F3A-204ENST00000366816 APPP05067 770 aa23.86■■□□□ 1.41
H3F3A-204ENST00000366816 DGKZQ13574 1117 aa23.86■■□□□ 1.41
H3F3A-204ENST00000366816 FAM227BQ96M60 508 aa23.86■■□□□ 1.41
H3F3A-204ENST00000366816 EPB41L4AQ9HCS5 686 aaPredicted RBP23.86■■□□□ 1.41
H3F3A-204ENST00000366816 CAPN15O75808 1086 aa23.85■■□□□ 1.41
H3F3A-204ENST00000366816 ANKRD23Q86SG2 305 aa23.85■■□□□ 1.41
H3F3A-204ENST00000366816 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
H3F3A-204ENST00000366816 ZFYVE28Q9HCC9 887 aa23.85■■□□□ 1.41
H3F3A-204ENST00000366816 PATL2C9JE40 543 aaKnown RBP23.84■■□□□ 1.41
H3F3A-204ENST00000366816 GNAT2P19087 354 aa23.84■■□□□ 1.41
H3F3A-204ENST00000366816 ABCB5Q2M3G0 1257 aa23.84■■□□□ 1.41
H3F3A-204ENST00000366816 AMOTL1Q8IY63 956 aa23.84■■□□□ 1.41
H3F3A-204ENST00000366816 AS3MTQ9HBK9 375 aa23.84■■□□□ 1.41
H3F3A-204ENST00000366816 A0A0D9SFI3 127 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 MINDY4BA8MYZ0 360 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 FKTNO75072 461 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 HMGCS2P54868 508 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 NMIQ13287 307 aaPredicted RBP23.83■■□□□ 1.41
H3F3A-204ENST00000366816 RAB3GAP1Q15042 981 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 FASTKD5Q7L8L6 764 aaKnown RBP23.83■■□□□ 1.41
H3F3A-204ENST00000366816 IFNL3Q8IZI9 196 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 WDR18Q9BV38 432 aa23.83■■□□□ 1.41
H3F3A-204ENST00000366816 MPHOSPH10O00566 681 aaKnown RBP23.82■■□□□ 1.4
H3F3A-204ENST00000366816 TDO2P48775 406 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 CDK8P49336 464 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 MTMR2Q13614 643 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 NOM1Q5C9Z4 860 aaKnown RBP23.82■■□□□ 1.4
H3F3A-204ENST00000366816 TREML2Q5T2D2 321 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 GIMAP6Q6P9H5 292 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 ZCCHC17Q9NP64 241 aaKnown RBP23.82■■□□□ 1.4
H3F3A-204ENST00000366816 GINM1Q9NU53 330 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 ARPP21Q9UBL0 812 aaPredicted RBP23.82■■□□□ 1.4
H3F3A-204ENST00000366816 SWAP70Q9UH65 585 aa23.82■■□□□ 1.4
H3F3A-204ENST00000366816 CYP2C8P10632 490 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 SDSP20132 328 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 GUCY1A2P33402 732 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 VPS53Q5VIR6 699 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 TBC1D2Q9BYX2 928 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 CABP5Q9NP86 173 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 HELLSQ9NRZ9 838 aa23.81■■□□□ 1.4
H3F3A-204ENST00000366816 FOXP2O15409 715 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 TLR2O60603 784 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 BACE1P56817 501 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 SEPT2Q15019 361 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 SBK1Q52WX2 424 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 C16orf86Q6ZW13 317 aa23.8■■□□□ 1.4
H3F3A-204ENST00000366816 PTPRFP10586 1907 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 AKR1B1P15121 316 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 GSPT1P15170 499 aaKnown RBP23.79■■□□□ 1.4
H3F3A-204ENST00000366816 MCMDC2Q4G0Z9 681 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 ACER1Q8TDN7 264 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 NACAP1Q9BZK3 213 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 CPA4Q9UI42 421 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 AGTPBP1Q9UPW5 1226 aa23.79■■□□□ 1.4
H3F3A-204ENST00000366816 USP17L10C9JJH3 530 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 CAP1Q01518 475 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 SP3Q02447 781 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 ZYXQ15942 572 aaKnown RBP23.78■■□□□ 1.4
H3F3A-204ENST00000366816 SH3D19Q5HYK7 790 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 TTC22Q5TAA0 569 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 ZNF589Q86UQ0 364 aaPredicted RBP23.78■■□□□ 1.4
H3F3A-204ENST00000366816 SKAP1Q86WV1 359 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 CD99L2Q8TCZ2 262 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 MCOLN1Q9GZU1 580 aa23.78■■□□□ 1.4
H3F3A-204ENST00000366816 ECM2O94769 699 aaPredicted RBP23.77■■□□□ 1.4
H3F3A-204ENST00000366816 CTU1Q7Z7A3 348 aaKnown RBP23.77■■□□□ 1.4
H3F3A-204ENST00000366816 CLEC10AQ8IUN9 316 aa23.77■■□□□ 1.4
H3F3A-204ENST00000366816 PROCA1Q8NCQ7 364 aaPredicted RBP23.77■■□□□ 1.4
H3F3A-204ENST00000366816 NAPBQ9H115 298 aa23.77■■□□□ 1.4
H3F3A-204ENST00000366816 EMILIN3Q9NT22 766 aa23.77■■□□□ 1.4
H3F3A-204ENST00000366816 CWC27Q6UX04 472 aaKnown RBP23.76■■□□□ 1.39
H3F3A-204ENST00000366816 TICAM2Q86XR7 235 aa23.76■■□□□ 1.39
H3F3A-204ENST00000366816 PARK7Q99497 189 aaKnown RBP23.76■■□□□ 1.39
H3F3A-204ENST00000366816 FEZ1Q99689 392 aa23.76■■□□□ 1.39
H3F3A-204ENST00000366816 TMOD4Q9NZQ9 345 aa23.76■■□□□ 1.39
H3F3A-204ENST00000366816 C19orf81C9J6K1 198 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 C17orf99Q6UX52 265 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 CENPQQ7L2Z9 268 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms