RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 PCDH1Q08174 1060 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 SNX17Q15036 470 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 NR0B2Q15466 257 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 CCDC142Q17RM4 750 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 FAM26DQ5JW98 314 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 ADGRF1Q5T601 910 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 THAP5Q7Z6K1 395 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 SIRT2Q8IXJ6 389 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 MFSD4AQ8N468 514 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZNF341Q9BYN7 854 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 LNPKQ9C0E8 428 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 BHLHE41Q9C0J9 482 aaPredicted RBP1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 KDM4CQ9H3R0 1056 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 MKRN1Q9UHC7 482 aaKnown RBP1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 GPR160Q9UJ42 338 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 MAPK8IP1Q9UQF2 711 aa1.4□□□□□ -2.19
RNU6-340P-201ENST00000364005 A0A087X1B8 175 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 METTL12A8MUP2 240 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 PLATP00750 562 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZGLP1P0C6A0 271 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 FGD1P98174 961 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 MVKQ03426 396 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 GPR162Q16538 588 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 WASHC4Q2M389 1173 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 TBC1D10BQ4KMP7 808 aaPredicted RBP1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 EPHA10Q5JZY3 1008 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 PDE12Q6L8Q7 609 aaKnown RBP1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 LIPIQ6XZB0 460 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZNF438Q7Z4V0 828 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 GPR152Q8TDT2 470 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 CDK5RAP1Q96SZ6 601 aaKnown RBP1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 KLC2Q9H0B6 622 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 GGNBP2Q9H3C7 697 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 GPBP1L1Q9HC44 474 aaPredicted RBP1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 GOPCQ9HD26 462 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 PRM3Q9NNZ6 103 aa1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-340P-201ENST00000364005 USP17L3A6NCW0 530 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 USP17L4A6NCW7 530 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 WASH4PA8MWX3 477 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 FOXO3O43524 673 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZNF862O60290 1169 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 BUB1BO60566 1050 aaPredicted RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 BRD2P25440 801 aaKnown RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 USP17L2Q6R6M4 530 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 TMPRSS7Q7RTY8 843 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 USP17L1Q7RTZ2 530 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 LDHDQ86WU2 507 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 CREG2Q8IUH2 290 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 SPPL2CQ8IUH8 684 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 PLEKHM2Q8IWE5 1019 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 NLGN1Q8N2Q7 840 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 PIWIL2Q8TC59 973 aaKnown RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 DDX54Q8TDD1 881 aaKnown RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 USP33Q8TEY7 942 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 SSBP3Q9BWW4 388 aaPredicted RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 TRIM8Q9BZR9 551 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZC3H12CQ9C0D7 883 aaKnown RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 CLEC4MQ9H2X3 399 aaPredicted RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 CCDC86Q9H6F5 360 aaKnown RBP1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 PCDHGC5Q9Y5F6 944 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 TACC3Q9Y6A5 838 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 CAPN6Q9Y6Q1 641 aa1.38□□□□□ -2.19
RNU6-340P-201ENST00000364005 A0A1W2PP55 124 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 SDHBP21912 280 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 WEE1P30291 646 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 ABL2P42684 1182 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZAP70P43403 619 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 NCKAP1LP55160 1127 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 GJA9P57773 515 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 YBX1P67809 324 aaKnown RBP1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 ABHD18Q0P651 414 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 KIF4BQ2VIQ3 1234 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 VWA3BQ502W6 1294 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZNF362Q5T0B9 420 aaPredicted RBP1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 SFRP5Q5T4F7 317 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 LCE1AQ5T7P2 110 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 PAPD7Q5XG87 772 aaKnown RBP1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 IGFL4Q6B9Z1 124 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 LARP1Q6PKG0 1096 aaKnown RBP1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 C22orf34Q6ZV56 151 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 LIMS2Q7Z4I7 341 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 PALM2Q8IXS6 379 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 AMER2Q8N7J2 671 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 PMEPA1Q969W9 287 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 CHRDQ9H2X0 955 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 SUSD2Q9UGT4 822 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 ZFR2Q9UPR6 939 aaKnown RBP1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 PCDHA5Q9Y5H7 936 aa1.37□□□□□ -2.19
RNU6-340P-201ENST00000364005 A0A096LPE4 126 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 A0A1W2PPZ6 126 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 CYSRT1A8MQ03 144 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 RBAK-RBAKDNI3L0D1 243 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 CBX7O95931 251 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 POU3F3P20264 500 aaPredicted RBP1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 CTGFP29279 349 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 LIMS1P48059 325 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 INHBCP55103 352 aa1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 MRPS21P82921 87 aaKnown RBP1.36□□□□□ -2.19
RNU6-340P-201ENST00000364005 ICAM4Q14773 271 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms