RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 RASA1P20936 1047 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 TFAP4Q01664 338 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 RASSF7Q02833 373 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 GABPAQ06546 454 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 FAM184AQ8NB25 1140 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 SLC44A5Q8NCS7 719 aa24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ZBTB12Q9Y330 459 aaPredicted RBP24.53■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CDKL5O76039 1030 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 BAG4O95429 457 aaKnown RBP24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 HLA-DOAP06340 250 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 CPLX2Q6PUV4 134 aaKnown RBP24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 RAB11FIP4Q86YS3 637 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 ZNF654Q8IZM8 581 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 PRMT6Q96LA8 375 aaPredicted RBP24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 DHX36Q9H2U1 1008 aaKnown RBP24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 MTMR6Q9Y217 621 aa24.52■■□□□ 1.52
MAP1LC3A-201ENST00000360668 SPDYE2BA6NHP3 402 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 SPDYE6P0CI01 402 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 DDX11Q96FC9 970 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FAM198AQ9UFP1 575 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 SWAP70Q9UH65 585 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TAOK2Q9UL54 1235 aa24.51■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TSPY3P0CV98 308 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TSPY8P0CW00 308 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 RPS12P25398 132 aaKnown RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 PPP2R5BQ15173 497 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 DLGAP5Q15398 846 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 DGKHQ86XP1 1220 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ANKS1AQ92625 1134 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 MYL10Q9BUA6 226 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 EHD4Q9H223 541 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TDRD3Q9H7E2 651 aaKnown RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 COL2A1P02458 1487 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FZD9O00144 591 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ENTPD3O75355 529 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 RXRAP19793 462 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 PRELPP51888 382 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FOXD4L5Q5VV16 416 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CATIPQ7Z7H3 387 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FOXD4L4Q8WXT5 416 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FAM217BQ9NTX9 383 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 SERPINB13Q9UIV8 391 aa24.5■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CCDC196A0A1B0GTZ2 297 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 DDAH1O94760 285 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 F13A1P00488 732 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CALM1P0DP23 149 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CALM2P0DP24 149 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CALM3P0DP25 149 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CDC27P30260 824 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ADD1P35611 737 aaKnown RBP24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CACNB3P54284 484 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 RTN1Q16799 776 aa24.49■■□□□ 1.51
MAP1LC3A-201ENST00000360668 VPS37CA5D8V6 355 aaPredicted RBP24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 NMT2O60551 498 aa24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 NEDD1Q8NHV4 660 aa24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 IL17RBQ9NRM6 502 aa24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TMOD2Q9NZR1 351 aa24.48■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FDPSP14324 419 aaKnown RBP24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 NTRK3Q16288 839 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 RCSD1Q6JBY9 416 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ZFPM1Q8IX07 1006 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 CCDC144CPQ8IYA2 1237 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 FANCBQ8NB91 859 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ATP6V1DQ9Y5K8 247 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 PLIN4Q96Q06 1357 aa24.47■■□□□ 1.51
MAP1LC3A-201ENST00000360668 GOLGA6L22H0YM25 854 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TCP10Q12799 353 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ZBED3Q96IU2 234 aaPredicted RBP24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ORC3Q9UBD5 711 aaPredicted RBP24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 PI4KBQ9UBF8 816 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ATRNL1Q5VV63 1379 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 IFNAR1P17181 557 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 TROAPQ12815 778 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 SPDYE2Q495Y8 402 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 RGS22Q8NE09 1264 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 NUP133Q8WUM0 1156 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ZNF70Q9UC06 446 aaPredicted RBP24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 MYH8P13535 1937 aa24.46■■□□□ 1.51
MAP1LC3A-201ENST00000360668 ZNF280AP59817 542 aaPredicted RBP24.45■■□□□ 1.5
MAP1LC3A-201ENST00000360668 FKBP1CQ5VVH2 108 aa24.45■■□□□ 1.5
MAP1LC3A-201ENST00000360668 CDC37L1Q7L3B6 337 aa24.45■■□□□ 1.5
MAP1LC3A-201ENST00000360668 DPF2Q92785 391 aa24.45■■□□□ 1.5
MAP1LC3A-201ENST00000360668 RBM28Q9NW13 759 aaKnown RBP24.45■■□□□ 1.5
MAP1LC3A-201ENST00000360668 STK36Q9NRP7 1315 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SIPA1L1O43166 1804 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 DDTLA6NHG4 134 aaPredicted RBP24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 H3BQV1 296 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SKOR2Q2VWA4 1001 aaPredicted RBP24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 IFFO2Q5TF58 517 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SH3BP5LQ7L8J4 393 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 KAT14Q9H8E8 782 aa24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 DICER1Q9UPY3 1922 aaKnown RBP24.44■■□□□ 1.5
MAP1LC3A-201ENST00000360668 LMNB1P20700 586 aa24.43■■□□□ 1.5
MAP1LC3A-201ENST00000360668 SHMT1P34896 483 aa24.43■■□□□ 1.5
MAP1LC3A-201ENST00000360668 FOXP4Q8IVH2 680 aaPredicted RBP24.43■■□□□ 1.5
MAP1LC3A-201ENST00000360668 MAP3K14Q99558 947 aa24.43■■□□□ 1.5
MAP1LC3A-201ENST00000360668 MYOZ2Q9NPC6 264 aa24.43■■□□□ 1.5
MAP1LC3A-201ENST00000360668 NOVP48745 357 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms