RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CDK5RAP2Q96SN8 1893 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 H3BQV1 296 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 EGFRP00533 1210 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 TDO2P48775 406 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 EVX2Q03828 476 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 UTP14CQ5TAP6 766 aaKnown RBP16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 IFFO2Q5TF58 517 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 MTA3Q9BTC8 594 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 DDNO94850 711 aaPredicted RBP16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 CDC42EP5Q6NZY7 148 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 CYB5R4Q7L1T6 521 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
CSNK1E-201ENST00000359867 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 USP5P45974 858 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 HDLBPQ00341 1268 aaKnown RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 DCP1AQ9NPI6 582 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 CCDC39Q9UFE4 941 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 ELP1O95163 1332 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 B4E1Z4 1266 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 FIBPO43427 364 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 PICALMQ13492 652 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 MFSD6Q6ZSS7 791 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 TDRD3Q9H7E2 651 aaKnown RBP16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
CSNK1E-201ENST00000359867 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 RESTQ13127 1097 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 FERMT3Q86UX7 667 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 NEDD4P46934 1319 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 LIFRP42702 1097 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 NFIAQ12857 509 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 GPC2Q8N158 579 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 CNOT7Q9UIV1 285 aaKnown RBP16.11■□□□□ 0.17
CSNK1E-201ENST00000359867 CLRN2A0PK11 232 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 WDHD1O75717 1129 aaPredicted RBP16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 DDX4Q9NQI0 724 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 SAP30BPQ9UHR5 308 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 CYP2D6P10635 497 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 PLCG2P16885 1265 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 RPS12P25398 132 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 MYOZ2Q9NPC6 264 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
CSNK1E-201ENST00000359867 FLT1P17948 1338 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 USP17L21D6R901 530 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 PPARAQ07869 468 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 NBPF9Q3BBW0 867 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 TBC1D10BQ4KMP7 808 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.176e-6■□□□□ 8.2
CSNK1E-201ENST00000359867 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
CSNK1E-201ENST00000359867 CPLX1O14810 134 aa16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 TERF1P54274 439 aa16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 TCP10Q12799 353 aa16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 DPF2Q92785 391 aa16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 LY9Q9HBG7 655 aa16.08■□□□□ 0.17
CSNK1E-201ENST00000359867 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 WNT10BO00744 389 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 KDM4AO75164 1064 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 CDKL5O76039 1030 aa16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 PCP11498 1178 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-201ENST00000359867 EPS15P42566 896 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms