RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.3
UBAP1-202ENST00000359544 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.3
UBAP1-202ENST00000359544 ELOA2Q8IYF1 753 aaPredicted RBP16.96■□□□□ 0.3
UBAP1-202ENST00000359544 KBTBD3Q8NAB2 608 aa16.96■□□□□ 0.3
UBAP1-202ENST00000359544 ADGRG1Q9Y653 693 aa16.96■□□□□ 0.3
UBAP1-202ENST00000359544 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-202ENST00000359544 RHOXF2BP0C7M4 288 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 RHOXF2Q9BQY4 288 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-202ENST00000359544 RNF40O75150 1001 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 MCM3P25205 808 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-202ENST00000359544 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 WDR93Q6P2C0 686 aa16.95■□□□□ 0.3
UBAP1-202ENST00000359544 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
UBAP1-202ENST00000359544 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-202ENST00000359544 PHACTR2O75167 634 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
UBAP1-202ENST00000359544 ZNF18P17022 549 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 USP8P40818 1118 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 ZNF569Q5MCW4 686 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 RESP18Q5W5W9 173 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 ENOX1Q8TC92 643 aaKnown RBP16.94■□□□□ 0.3
UBAP1-202ENST00000359544 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 A1BGP04217 495 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 MAP9Q49MG5 647 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 SHC4Q6S5L8 630 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
UBAP1-202ENST00000359544 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBAP1-202ENST00000359544 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
UBAP1-202ENST00000359544 TJP1Q07157 1748 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 HEG1Q9ULI3 1381 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 SOWAHDA6NJG2 315 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 MLKLQ8NB16 471 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 NAPGQ99747 312 aaPredicted RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 LRRIQ3A6PVS8 624 aaPredicted RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 CPLX1O14810 134 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 PSEN1P49768 467 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 GSCP56915 257 aaPredicted RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 MTF1Q14872 753 aa16.93■□□□□ 0.3
UBAP1-202ENST00000359544 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
UBAP1-202ENST00000359544 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 ERLIN2O94905 339 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 PDE4BQ07343 736 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
UBAP1-202ENST00000359544 MYO1AQ9UBC5 1043 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
UBAP1-202ENST00000359544 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
UBAP1-202ENST00000359544 CHGBP05060 677 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 NR1I3Q14994 352 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 NDUFB9Q9Y6M9 179 aa16.92■□□□□ 0.3
UBAP1-202ENST00000359544 MAP3K15Q6ZN16 1313 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
UBAP1-202ENST00000359544 TFCP2Q12800 502 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 RAD9BQ6WBX8 426 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 CCDC148Q8NFR7 591 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 GOLGA8BA8MQT2 603 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 ANKRD65E5RJM6 399 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 PTGER2P43116 358 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 SLC35F6Q8N357 371 aa16.91■□□□□ 0.3
UBAP1-202ENST00000359544 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 PRPF6O94906 941 aaKnown RBP16.9■□□□□ 0.3
UBAP1-202ENST00000359544 E2F4Q16254 413 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 LONRF3Q496Y0 759 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 KCNH3Q9ULD8 1083 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
UBAP1-202ENST00000359544 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 CLGNO14967 610 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 SHOX2O60902 331 aaPredicted RBP16.9■□□□□ 0.3
UBAP1-202ENST00000359544 SYF2O95926 243 aaKnown RBP16.9■□□□□ 0.3
UBAP1-202ENST00000359544 BMP6P22004 513 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 CDC27P30260 824 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 NEXNQ0ZGT2 675 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 PTPAQ15257 358 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 CCDC51Q96ER9 411 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
UBAP1-202ENST00000359544 MTFR1LQ9H019 292 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms