RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 BRD3Q15059 726 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 SMYD4Q8IYR2 804 aaPredicted RBP12.41□□□□□ -0.42
RPE-202ENST00000359429 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 STRBPQ96SI9 672 aaKnown RBP12.41□□□□□ -0.42
RPE-202ENST00000359429 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
RPE-202ENST00000359429 TCRBV5S4A2TA0A5A2 114 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 IFNAR1P17181 557 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 PBX1P40424 430 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 GPS2Q13227 327 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 ZNF569Q5MCW4 686 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 SHISA4Q96DD7 197 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
RPE-202ENST00000359429 CDC23Q9UJX2 597 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 LIFRP42702 1097 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 AFMP43652 599 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 PHKA1P46020 1223 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 UBE3CQ15386 1083 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 ACRBPQ8NEB7 543 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
RPE-202ENST00000359429 GREM2Q9H772 168 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
RPE-202ENST00000359429 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
RPE-202ENST00000359429 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
RPE-202ENST00000359429 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.43
RPE-202ENST00000359429 CASP14P31944 242 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 FXR1P51114 621 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPE-202ENST00000359429 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
RPE-202ENST00000359429 VPS18Q9P253 973 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 RAB21Q9UL25 225 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 RNF225M0QZC1 329 aaPredicted RBP12.39□□□□□ -0.43
RPE-202ENST00000359429 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
RPE-202ENST00000359429 CUL4BQ13620 913 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 HNRNPLLQ8WVV9 542 aaKnown RBP12.39□□□□□ -0.43
RPE-202ENST00000359429 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 PSD3Q9NYI0 1048 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 LAMB4A4D0S4 1761 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 ATRNO75882 1429 aa12.39□□□□□ -0.43
RPE-202ENST00000359429 WNT7AO00755 349 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 KIF5CO60282 957 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 MFAP3LO75121 409 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 GYPCP04921 128 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 ITGA6P23229 1130 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 CDC25AP30304 524 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 USP5P45974 858 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 VSNL1P62760 191 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 DPYDQ12882 1025 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 SAFBQ15424 915 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPE-202ENST00000359429 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
RPE-202ENST00000359429 RRP12Q5JTH9 1297 aaKnown RBP12.38□□□□□ -0.43
RPE-202ENST00000359429 RASGRP2Q7LDG7 609 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
RPE-202ENST00000359429 MSANTD4Q8NCY6 345 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
RPE-202ENST00000359429 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 MYO1CO00159 1063 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 PRKAB2O43741 272 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
RPE-202ENST00000359429 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 SPATA1Q5VX52 437 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 GOLGA5Q8TBA6 731 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 AK7Q96M32 723 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
RPE-202ENST00000359429 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 SNAP23O00161 211 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 ERVK-24P63145 666 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 CDKAL1Q5VV42 579 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 FOXR1Q6PIV2 292 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 C10orf67Q8IYJ2 551 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
RPE-202ENST00000359429 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 STAMQ92783 540 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 PLA2G12BQ9BX93 195 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 ARMT1Q9H993 441 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 MST1RQ04912 1400 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms