RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
PDLIM5-203ENST00000359265 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
PDLIM5-203ENST00000359265 ERICH2A1L162 156 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 CYP2D6P10635 497 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 DSG3P32926 999 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 EVCP57679 992 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 NUCB2P80303 420 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 HABP4Q5JVS0 413 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 NECAB1Q8N987 351 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 DPF2Q92785 391 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 ZIC5Q96T25 663 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 ZSWIM5Q9P217 1185 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
PDLIM5-203ENST00000359265 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 PFKFB2O60825 505 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 STK3Q13188 491 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 GPC2Q8N158 579 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 UBAC1Q9BSL1 405 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 MYH6P13533 1939 aa16.25■□□□□ 0.19
PDLIM5-203ENST00000359265 LIFRP42702 1097 aa16.24■□□□□ 0.19
PDLIM5-203ENST00000359265 CFAP100Q494V2 611 aa16.24■□□□□ 0.19
PDLIM5-203ENST00000359265 GOLGA8BA8MQT2 603 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 PDIA3P30101 505 aaKnown RBP16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 PICALMQ13492 652 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 WTAPQ15007 396 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 DLGAP5Q15398 846 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 IQCA1Q86XH1 822 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 MTMR14Q8NCE2 650 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 IGDCC4Q8TDY8 1250 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 LY9Q9HBG7 655 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 TMOD2Q9NZR1 351 aa16.23■□□□□ 0.19
PDLIM5-203ENST00000359265 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 MYO1BO43795 1136 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 PRDM1O75626 825 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 SCRN1Q12765 414 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 TMTC2Q8N394 836 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-203ENST00000359265 TNKSO95271 1327 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 GJB2P29033 226 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 EVX2Q03828 476 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 SYNE3Q6ZMZ3 975 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 C16orf86Q6ZW13 317 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 IDI2Q9BXS1 227 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 MYOZ2Q9NPC6 264 aa16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 GREB1LQ9C091 1923 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-203ENST00000359265 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 H7C1D1 291 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 ZBTB43O43298 467 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 HLA-DOAP06340 250 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 PLCD1P51178 756 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 CCT2P78371 535 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 CCDC178Q5BJE1 867 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 DYNLL2Q96FJ2 89 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 DDX4Q9NQI0 724 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
PDLIM5-203ENST00000359265 NID2Q14112 1375 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms