RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 KIF23Q02241 960 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 SBK1Q52WX2 424 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 MFSD14BQ5SR56 506 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 MYO3BQ8WXR4 1341 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 PITPNM2Q9BZ72 1349 aa12.58□□□□□ -0.4
TRAPPC4-201ENST00000359005 CLRN2A0PK11 232 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 FOXP2O15409 715 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 SYT1P21579 422 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 PRDX5P30044 214 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZNF157P51786 506 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 TMEM67Q5HYA8 995 aa12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 AATFQ9NY61 560 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC4-201ENST00000359005 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 MBD3O95983 291 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 CALM1P0DP23 149 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 CALM2P0DP24 149 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 CALM3P0DP25 149 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 STK3Q13188 491 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 PRKG1Q13976 671 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 DLGAP5Q15398 846 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 SGMS1Q86VZ5 419 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 NECAB1Q8N987 351 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 WASF1Q92558 559 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 CSRNP1Q96S65 589 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZSCAN16Q9H4T2 348 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
TRAPPC4-201ENST00000359005 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 B4E1Z4 1266 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZBTB43O43298 467 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 KDM4AO75164 1064 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 SLC10A3P09131 477 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 NOGQ13253 232 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 WTAPQ15007 396 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 MCTP1Q6DN14 999 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 MRIQ9BWK5 157 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 DCP1AQ9NPI6 582 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-201ENST00000359005 VPS37CA5D8V6 355 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 PRKAB2O43741 272 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 ORC4O43929 436 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 TRAK2O60296 914 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 LARGE1O95461 756 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 F13A1P00488 732 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 CTDSPL2Q05D32 466 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 SMARCC2Q8TAQ2 1214 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 ISY1Q9ULR0 285 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 TTF2Q9UNY4 1162 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-201ENST00000359005 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 USP17L21D6R901 530 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 FGRP09769 529 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 BTDP43251 543 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 MMP14P50281 582 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 SCRN1Q12765 414 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 TRIM29Q14134 588 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 LDLRAD1Q5T700 205 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 HHIPL2Q6UWX4 724 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZSWIM5Q9P217 1185 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms