RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 INPP5BP32019 993 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
TPM1-206ENST00000358278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.03■□□□□ 0.48
TPM1-206ENST00000358278 KRT23Q9C075 422 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 CSADQ9Y600 493 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 TACC3Q9Y6A5 838 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
TPM1-206ENST00000358278 FGRP09769 529 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 CAP2P40123 477 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 KRT32Q14532 448 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 ABCB5Q2M3G0 1257 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 ZKSCAN4Q969J2 545 aaPredicted RBP18.03■□□□□ 0.48
TPM1-206ENST00000358278 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 SNX14Q9Y5W7 946 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 PTPRFP10586 1907 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 B4E1Z4 1266 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 UBE2Q2LH0YL09 131 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 MAP3K9P80192 1104 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 ANKRD13AQ8IZ07 590 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 NCOA7Q8NI08 942 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 ESR2Q92731 530 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 CABP5Q9NP86 173 aa18.02■□□□□ 0.48
TPM1-206ENST00000358278 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.02■□□□□ 0.48
TPM1-206ENST00000358278 TMEM88BA6NKF7 163 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 AKR1B1P15121 316 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 VGLL4Q14135 290 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
TPM1-206ENST00000358278 KCNB2Q92953 911 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 PICK1Q9NRD5 415 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 KDM4AO75164 1064 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 GH2P01242 217 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 ASNSP08243 561 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 HUNKP57058 714 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 TFAP4Q01664 338 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
TPM1-206ENST00000358278 SCYL3Q8IZE3 742 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
TPM1-206ENST00000358278 NT5C2P49902 561 aa18■□□□□ 0.47
TPM1-206ENST00000358278 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
TPM1-206ENST00000358278 SHROOM1Q2M3G4 852 aaPredicted RBP18■□□□□ 0.47
TPM1-206ENST00000358278 TMEM179Q6ZVK1 233 aa18■□□□□ 0.47
TPM1-206ENST00000358278 ABT1Q9ULW3 272 aaKnown RBP18■□□□□ 0.47
TPM1-206ENST00000358278 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 APLP1P51693 650 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 ANAPC15P60006 121 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 NOL9Q5SY16 702 aaKnown RBP17.99■□□□□ 0.47
TPM1-206ENST00000358278 LDLRAD1Q5T700 205 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 CLMNQ96JQ2 1002 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
TPM1-206ENST00000358278 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
TPM1-206ENST00000358278 UNCXA6NJT0 531 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 ELP3Q9H9T3 547 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.98■□□□□ 0.47
TPM1-206ENST00000358278 SNCAIPQ9Y6H5 919 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 PSMA5P28066 241 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 JAG1P78504 1218 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 SEPT2Q15019 361 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 TLL2Q9Y6L7 1015 aa17.98■□□□□ 0.47
TPM1-206ENST00000358278 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
TPM1-206ENST00000358278 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
TPM1-206ENST00000358278 RBM25P49756 843 aaKnown RBP17.97■□□□□ 0.47
TPM1-206ENST00000358278 ICA1Q05084 483 aa17.97■□□□□ 0.47
TPM1-206ENST00000358278 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
TPM1-206ENST00000358278 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
TPM1-206ENST00000358278 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
TPM1-206ENST00000358278 USP17L5A8MUK1 530 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 MCM5P33992 734 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 BLOC1S2Q6QNY1 142 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 NKX2-3Q8TAU0 364 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 TBC1D32Q96NH3 1257 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 ZKSCAN3Q9BRR0 538 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
TPM1-206ENST00000358278 NMT2O60551 498 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 PTPRAP18433 802 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 SART3Q15020 963 aaKnown RBP17.95■□□□□ 0.46
TPM1-206ENST00000358278 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
TPM1-206ENST00000358278 ERO1BQ86YB8 467 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 KANSL2Q9H9L4 492 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms