RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 CTAGE4Q8IX94 777 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 CCDC68Q9H2F9 335 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 TYW5A2RUC4 315 aaKnown RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 I3L4J1 428 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 TOM1O60784 492 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 KRT2P35908 639 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 LACTBP83111 547 aaPredicted RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 ATP6V1E2Q96A05 226 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 PPP1R16BQ96T49 567 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 PYM1Q9BRP8 204 aaKnown RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 ZBTB43O43298 467 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 NOX5Q96PH1 765 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 FANCAO15360 1455 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 ESPNB1AK53 854 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 GNPATO15228 680 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 CWF19L2Q2TBE0 894 aaKnown RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 CC2D2BQ6DHV5 1058 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 GBP6Q6ZN66 633 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 FGD4Q96M96 766 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 EYA3Q99504 573 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 FTOQ9C0B1 505 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHD3-202ENST00000358181 MLXIPQ9HAP2 919 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 KIF2AO00139 706 aaPredicted RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
CHD3-202ENST00000358181 CCDC62Q6P9F0 684 aa10.83□□□□□ -0.68
CHD3-202ENST00000358181 NKTRP30414 1462 aaKnown RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 SMAP1Q8IYB5 467 aaPredicted RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 ESR2Q92731 530 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 DNAJC7Q99615 494 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 CTNND2Q9UQB3 1225 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 DAAM1Q9Y4D1 1078 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 PSMA7O14818 248 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 LDHBP07195 334 aaKnown RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 EFCC1Q9HA90 598 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 ZBBXA8MT70 800 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 SUPT3HB4E1H0 165 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 UFL1O94874 794 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 HEXIM1O94992 359 aaKnown RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 GNGT2O14610 69 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 DDX21Q9NR30 783 aaKnown RBP eCLIP10.82□□□□□ -0.68
CHD3-202ENST00000358181 SLC13A4Q9UKG4 626 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 CSADQ9Y600 493 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 VPS41P49754 854 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 IQCB1Q15051 598 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 PUM3Q15397 648 aaKnown RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 HHATQ5VTY9 493 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 ZFYVE19Q96K21 471 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 NYXQ9GZU5 481 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 ECE1P42892 770 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 CACNA2D3Q8IZS8 1091 aa10.82□□□□□ -0.68
CHD3-202ENST00000358181 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
CHD3-202ENST00000358181 SNRPA1P09661 255 aaKnown RBP10.81□□□□□ -0.68
CHD3-202ENST00000358181 GBP1P32455 592 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 RAP1GDS1P52306 607 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 GCNAQ96QF7 691 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 ESRRBO95718 433 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 RDH13Q8NBN7 331 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 HAUS8Q9BT25 410 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 VPS37BQ9H9H4 285 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 CTAGE9A4FU28 777 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 ARHGAP42A6NI28 874 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 FAM102BQ5T8I3 360 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHD3-202ENST00000358181 GSTA4O15217 222 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
CHD3-202ENST00000358181 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 INPP5FQ9Y2H2 1132 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 ARHGEF35A5YM69 484 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 PYGLP06737 847 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 MMEL1Q495T6 779 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 CTAGE3PQ8IX95 158 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
CHD3-202ENST00000358181 CALCOCO1Q9P1Z2 691 aa10.81□□□□□ -0.68
CHD3-202ENST00000358181 TNNI1P19237 187 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 COG4Q9H9E3 785 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 TEKT2Q9UIF3 430 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 LMBR1LQ6UX01 489 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 CCDC42Q96M95 316 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 SH2D4AQ9H788 454 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 TRIM35Q9UPQ4 493 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 MSH6P52701 1360 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHD3-202ENST00000358181 MCM5P33992 734 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 HABP4Q5JVS0 413 aaKnown RBP10.8□□□□□ -0.68
CHD3-202ENST00000358181 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 PPIP5K1Q6PFW1 1433 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms