RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 ABL1P00519 1130 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 RHOXF2BP0C7M4 288 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 RHOXF2Q9BQY4 288 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 ACBD3Q9H3P7 528 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 NID2Q14112 1375 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 UBN2Q6ZU65 1347 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 RANBP6O60518 1105 aaKnown RBP13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 GYPCP04921 128 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 GRIN1Q05586 938 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 ATRNO75882 1429 aa13.76□□□□□ -0.21
SMARCAL1-201ENST00000357276 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 SPATA1Q5VX52 437 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 EYA2O00167 538 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 RNF40O75150 1001 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 APPBP2Q92624 585 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 CDC5LQ99459 802 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 CYB5R4Q7L1T6 521 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 NOSTRINQ8IVI9 506 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 PLBD2Q8NHP8 589 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 PUS7LQ9H0K6 701 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 WWC3Q9ULE0 1092 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 HPCAL4Q9UM19 191 aa13.75□□□□□ -0.21
SMARCAL1-201ENST00000357276 ZNF213O14771 459 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 ERVK-24P63145 666 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 LRRC24Q50LG9 513 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 PHKBQ93100 1093 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 ATP5J2-PTCD1G3V325 749 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 CASP14P31944 242 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 USP14P54578 494 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 SPECC1Q5M775 1068 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTAGE1Q96RT6 745 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 ACRBPQ8NEB7 543 aa13.74□□□□□ -0.21
SMARCAL1-201ENST00000357276 CHD4Q14839 1912 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 PHACTR2O75167 634 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 SNRPA1P09661 255 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 SENP2Q9HC62 589 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
SMARCAL1-201ENST00000357276 MMP1P03956 469 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 PSMD14O00487 310 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 TRDNQ13061 729 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 COG1Q8WTW3 980 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 GPAA1O43292 621 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 FAM107BQ9H098 131 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 LY9Q9HBG7 655 aa13.72□□□□□ -0.21
SMARCAL1-201ENST00000357276 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 UBE2Q2LH0YL09 131 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 AGPSO00116 658 aa13.71□□□□□ -0.21
SMARCAL1-201ENST00000357276 MCM3P25205 808 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms