RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CDKL5O76039 1030 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 MAP3K11Q16584 847 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
NPAS3-202ENST00000356141 TTF2Q9UNY4 1162 aaKnown RBP20.43■□□□□ 0.86
NPAS3-202ENST00000356141 RAD21O60216 631 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 RBM5P52756 815 aaKnown RBP eCLIP20.42■□□□□ 0.86
NPAS3-202ENST00000356141 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 BIN1O00499 593 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
NPAS3-202ENST00000356141 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 ATP6V0A2Q9Y487 856 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 MROH7-TTC4A0A0A0MT08 1334 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
NPAS3-202ENST00000356141 RRP9O43818 475 aaKnown RBP20.41■□□□□ 0.86
NPAS3-202ENST00000356141 BAG3O95817 575 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 NDUFA8P51970 172 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 TCP10Q12799 353 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 CRACR2BQ8N4Y2 399 aaPredicted RBP20.41■□□□□ 0.86
NPAS3-202ENST00000356141 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 ZNF830Q96NB3 372 aaPredicted RBP20.41■□□□□ 0.86
NPAS3-202ENST00000356141 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
NPAS3-202ENST00000356141 WDHD1O75717 1129 aaPredicted RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 FMNL1O95466 1100 aaPredicted RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 TSPY3P0CV98 308 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 TSPY8P0CW00 308 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 HOXA10P31260 410 aaPredicted RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 PDE4BQ07343 736 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 ANO6Q4KMQ2 910 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 LINC00301Q8NCQ3 95 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 IL17RBQ9NRM6 502 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 RCOR1Q9UKL0 485 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 ELP1O95163 1332 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 GPKOWQ92917 476 aaPredicted RBP eCLIP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 ANAPC4Q9UJX5 808 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 SPTLC2O15270 562 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 GRIN1Q05586 938 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 TYRO3Q06418 890 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 EARS2Q5JPH6 523 aaKnown RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 C12orf60Q5U649 245 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 CCDC73Q6ZRK6 1079 aa20.4■□□□□ 0.86
NPAS3-202ENST00000356141 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
NPAS3-202ENST00000356141 NPR1P16066 1061 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 IFNAR1P17181 557 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 ANO1Q5XXA6 986 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 SP8Q8IXZ3 490 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 CABP5Q9NP86 173 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 ARPP21Q9UBL0 812 aaPredicted RBP20.39■□□□□ 0.85
NPAS3-202ENST00000356141 AP5Z1O43299 807 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 SRBD1Q8N5C6 995 aaKnown RBP20.39■□□□□ 0.85
NPAS3-202ENST00000356141 SPC24Q8NBT2 197 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
NPAS3-202ENST00000356141 VAT1LQ9HCJ6 419 aa20.39■□□□□ 0.85
NPAS3-202ENST00000356141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.39■□□□□ 0.85
NPAS3-202ENST00000356141 C21orf2O43822 256 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
NPAS3-202ENST00000356141 ATP2B2Q01814 1243 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 AOC3Q16853 763 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
NPAS3-202ENST00000356141 SCAF8Q9UPN6 1271 aaKnown RBP20.38■□□□□ 0.85
NPAS3-202ENST00000356141 DAGLAQ9Y4D2 1042 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 IL1R1P14778 569 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 TROAPQ12815 778 aa20.38■□□□□ 0.85
NPAS3-202ENST00000356141 SHROOM1Q2M3G4 852 aaPredicted RBP20.38■□□□□ 0.85
NPAS3-202ENST00000356141 ZNF444Q8N0Y2 327 aaPredicted RBP20.38■□□□□ 0.85
NPAS3-202ENST00000356141 SLC3A2P08195 630 aaKnown RBP20.37■□□□□ 0.85
NPAS3-202ENST00000356141 SLC15A2Q16348 729 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 SDF4Q9BRK5 362 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 DDX4Q9NQI0 724 aaKnown RBP20.37■□□□□ 0.85
NPAS3-202ENST00000356141 FLT1P17948 1338 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 H0YIN7 160 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 WNT7AO00755 349 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 PDE6BP35913 854 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 CCDC173Q0VFZ6 552 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 RASGRP4Q8TDF6 673 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 CLSTN2Q9H4D0 955 aa20.37■□□□□ 0.85
NPAS3-202ENST00000356141 CCDC192P0DO97 292 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 GSTO1P78417 241 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 SNW1Q13573 536 aaKnown RBP20.36■□□□□ 0.85
NPAS3-202ENST00000356141 RCSD1Q6JBY9 416 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 HOMER1Q86YM7 354 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 PCDHB6Q9Y5E3 794 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 KINO60870 393 aaKnown RBP20.36■□□□□ 0.85
NPAS3-202ENST00000356141 NFIAQ12857 509 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 ZFPM1Q8IX07 1006 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 PDILTQ8N807 584 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 CTCFLQ8NI51 663 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-202ENST00000356141 FUCA2Q9BTY2 467 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
NPAS3-202ENST00000356141 RHBDL3P58872 404 aa20.35■□□□□ 0.85
NPAS3-202ENST00000356141 RTEL1Q9NZ71 1219 aa20.35■□□□□ 0.85
NPAS3-202ENST00000356141 MKRN1Q9UHC7 482 aaKnown RBP20.35■□□□□ 0.85
NPAS3-202ENST00000356141 SASS6Q6UVJ0 657 aa20.35■□□□□ 0.85
NPAS3-202ENST00000356141 AMOTL1Q8IY63 956 aa20.35■□□□□ 0.85
NPAS3-202ENST00000356141 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms