RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 BMP15O95972 392 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 WHAMMP3Q1A5X7 153 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 NEK11Q8NG66 645 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 ADD3Q9UEY8 706 aaKnown RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 APPP05067 770 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 IVLP07476 585 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 PDE6AP16499 860 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 TMTC1Q8IUR5 882 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 GSDMAQ96QA5 445 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 EPC1Q9H2F5 836 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 ANKZF1Q9H8Y5 726 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 SAMSN1Q9NSI8 373 aaKnown RBP12.99□□□□□ -0.33
CAPN9-202ENST00000354537 FEZ2Q9UHY8 353 aaPredicted RBP12.99□□□□□ -0.33
CAPN9-202ENST00000354537 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
CAPN9-202ENST00000354537 MFAP3LO75121 409 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 CUL4BQ13620 913 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
CAPN9-202ENST00000354537 SENP2Q9HC62 589 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
CAPN9-202ENST00000354537 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
CAPN9-202ENST00000354537 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 ACTN2P35609 894 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 TRIM14Q14142 442 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
CAPN9-202ENST00000354537 RAD9BQ6WBX8 426 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 CRACR2BQ8N4Y2 399 aaPredicted RBP12.98□□□□□ -0.33
CAPN9-202ENST00000354537 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 PIH1D3Q9NQM4 214 aaKnown RBP12.98□□□□□ -0.33
CAPN9-202ENST00000354537 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 GNAT2P19087 354 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 RXRAP19793 462 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 RBL2Q08999 1139 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
CAPN9-202ENST00000354537 RTN1Q16799 776 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 AIDAQ96BJ3 306 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 DESI2Q9BSY9 194 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 ACBD3Q9H3P7 528 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
CAPN9-202ENST00000354537 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 SPAG1Q07617 926 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 PI16Q6UXB8 463 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 ZCRB1Q8TBF4 217 aaKnown RBP12.97□□□□□ -0.33
CAPN9-202ENST00000354537 STAG1Q8WVM7 1258 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 PYM1Q9BRP8 204 aaKnown RBP12.97□□□□□ -0.33
CAPN9-202ENST00000354537 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 H3BQF6 201 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
CAPN9-202ENST00000354537 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
CAPN9-202ENST00000354537 TNS3Q68CZ2 1445 aa12.97□□□□□ -0.33
CAPN9-202ENST00000354537 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 PDE8BO95263 885 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 GRIN1Q05586 938 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 MTF1Q14872 753 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 WDR93Q6P2C0 686 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 MFSD6Q6ZSS7 791 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
CAPN9-202ENST00000354537 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.33
CAPN9-202ENST00000354537 NAPBQ9H115 298 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 PCDHB6Q9Y5E3 794 aa12.96□□□□□ -0.33
CAPN9-202ENST00000354537 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 ZBTB22O15209 634 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 TEX33O43247 280 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 IDH1O75874 414 aaKnown RBP12.96□□□□□ -0.34
CAPN9-202ENST00000354537 CTAGE8P0CG41 777 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 XBP1P17861 261 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 MCM3P25205 808 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 PTPN21Q16825 1174 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 SPECC1Q5M775 1068 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 FAM71BQ8TC56 605 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 RNF26Q9BY78 433 aaPredicted RBP12.96□□□□□ -0.34
CAPN9-202ENST00000354537 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.34
CAPN9-202ENST00000354537 VIPAS39Q9H9C1 493 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 MED4Q9NPJ6 270 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 LZTFL1Q9NQ48 299 aa12.96□□□□□ -0.34
CAPN9-202ENST00000354537 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 DCCP43146 1447 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms