RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TSPY3P0CV98 308 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 TSPY8P0CW00 308 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 PDIA4P13667 645 aaKnown RBP24■■□□□ 1.43
TRIM4-202ENST00000354241 RASA1P20936 1047 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 ADD1P35611 737 aaKnown RBP24■■□□□ 1.43
TRIM4-202ENST00000354241 AGBL3Q8NEM8 1001 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 NUP133Q8WUM0 1156 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 F13A1P00488 732 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 TCP10Q12799 353 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 CPLX2Q6PUV4 134 aaKnown RBP24■■□□□ 1.43
TRIM4-202ENST00000354241 PRMT6Q96LA8 375 aaPredicted RBP24■■□□□ 1.43
TRIM4-202ENST00000354241 IDI2Q9BXS1 227 aa24■■□□□ 1.43
TRIM4-202ENST00000354241 HLA-DOAP06340 250 aa23.99■■□□□ 1.43
TRIM4-202ENST00000354241 MCTP1Q6DN14 999 aa23.99■■□□□ 1.43
TRIM4-202ENST00000354241 CDKL5O76039 1030 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 FOSBP53539 338 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 RTN1Q16799 776 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 FOXD4L6Q3SYB3 417 aaPredicted RBP23.98■■□□□ 1.43
TRIM4-202ENST00000354241 FOXD4L3Q6VB84 417 aaPredicted RBP23.98■■□□□ 1.43
TRIM4-202ENST00000354241 CDC37L1Q7L3B6 337 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 CATIPQ7Z7H3 387 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 ZFPM1Q8IX07 1006 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 CHAMP1Q96JM3 812 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 FAM198AQ9UFP1 575 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 NID2Q14112 1375 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 GOLGA6L22H0YM25 854 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 H3BQV1 296 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 TNIP1Q15025 636 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 DLGAP5Q15398 846 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
TRIM4-202ENST00000354241 FAM217BQ9NTX9 383 aaPredicted RBP23.98■■□□□ 1.43
TRIM4-202ENST00000354241 SPDYE2BA6NHP3 402 aa23.97■■□□□ 1.43
TRIM4-202ENST00000354241 SPDYE6P0CI01 402 aa23.97■■□□□ 1.43
TRIM4-202ENST00000354241 FDPSP14324 419 aaKnown RBP23.97■■□□□ 1.43
TRIM4-202ENST00000354241 PRELPP51888 382 aa23.97■■□□□ 1.43
TRIM4-202ENST00000354241 RCAN1P53805 252 aa23.97■■□□□ 1.43
TRIM4-202ENST00000354241 ORC3Q9UBD5 711 aaPredicted RBP23.97■■□□□ 1.43
TRIM4-202ENST00000354241 GABPAQ06546 454 aa23.96■■□□□ 1.43
TRIM4-202ENST00000354241 IL17RBQ9NRM6 502 aa23.96■■□□□ 1.43
TRIM4-202ENST00000354241 SERPINB13Q9UIV8 391 aa23.96■■□□□ 1.43
TRIM4-202ENST00000354241 CCDC178Q5BJE1 867 aa23.96■■□□□ 1.43
TRIM4-202ENST00000354241 ZSCAN29Q8IWY8 852 aaPredicted RBP23.96■■□□□ 1.43
TRIM4-202ENST00000354241 TMOD2Q9NZR1 351 aa23.96■■□□□ 1.43
TRIM4-202ENST00000354241 FANCBQ8NB91 859 aa23.95■■□□□ 1.42
TRIM4-202ENST00000354241 DHX36Q9H2U1 1008 aaKnown RBP23.95■■□□□ 1.42
TRIM4-202ENST00000354241 TCP11L1Q9NUJ3 509 aa23.95■■□□□ 1.42
TRIM4-202ENST00000354241 SWAP70Q9UH65 585 aa23.95■■□□□ 1.42
TRIM4-202ENST00000354241 SIPA1L1O43166 1804 aa23.95■■□□□ 1.42
TRIM4-202ENST00000354241 CCDC196A0A1B0GTZ2 297 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 NPM3O75607 178 aaKnown RBP23.94■■□□□ 1.42
TRIM4-202ENST00000354241 EIF6P56537 245 aaKnown RBP23.94■■□□□ 1.42
TRIM4-202ENST00000354241 NTRK3Q16288 839 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 RCSD1Q6JBY9 416 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 ARHGAP27Q6ZUM4 889 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 FERMT3Q86UX7 667 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 PHKBQ93100 1093 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 ATP6V1DQ9Y5K8 247 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 TCHHQ07283 1943 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 CLRN2A0PK11 232 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 DDAH1O94760 285 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 CALM1P0DP23 149 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 CALM2P0DP24 149 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 CALM3P0DP25 149 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 DGKHQ86XP1 1220 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 KAT14Q9H8E8 782 aa23.94■■□□□ 1.42
TRIM4-202ENST00000354241 DDTLA6NHG4 134 aaPredicted RBP23.93■■□□□ 1.42
TRIM4-202ENST00000354241 NEDD1Q8NHV4 660 aa23.93■■□□□ 1.42
TRIM4-202ENST00000354241 ENTPD3O75355 529 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 SH3BP5LQ7L8J4 393 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 CRACR2BQ8N4Y2 399 aaPredicted RBP23.92■■□□□ 1.42
TRIM4-202ENST00000354241 EHD4Q9H223 541 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 ZNF70Q9UC06 446 aaPredicted RBP23.92■■□□□ 1.42
TRIM4-202ENST00000354241 TCP10L2B9ZVM9 353 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 PTMSP20962 102 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 GUCY1B3Q02153 619 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 SSRP1Q08945 709 aaKnown RBP23.92■■□□□ 1.42
TRIM4-202ENST00000354241 TROAPQ12815 778 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 PPP2R5BQ15173 497 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 ANKS1AQ92625 1134 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 SLC26A6Q9BXS9 759 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 STX8Q9UNK0 236 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 GJA3Q9Y6H8 435 aa23.92■■□□□ 1.42
TRIM4-202ENST00000354241 FZD9O00144 591 aa23.91■■□□□ 1.42
TRIM4-202ENST00000354241 IFNAR1P17181 557 aa23.91■■□□□ 1.42
TRIM4-202ENST00000354241 MTMR14Q8NCE2 650 aa23.91■■□□□ 1.42
TRIM4-202ENST00000354241 C8orf76Q96K31 380 aa23.91■■□□□ 1.42
TRIM4-202ENST00000354241 PI4KBQ9UBF8 816 aa23.91■■□□□ 1.42
TRIM4-202ENST00000354241 MYH6P13533 1939 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 SHTN1A0MZ66 631 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 RPS12P25398 132 aaKnown RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 SHMT1P34896 483 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 CMTR1Q8N1G2 835 aaKnown RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 CCDC82Q8N4S0 544 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 SYT17Q9BSW7 474 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 TRIM34Q9BYJ4 488 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 RBM28Q9NW13 759 aaKnown RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 FMNL1O95466 1100 aaPredicted RBP23.9■■□□□ 1.42
TRIM4-202ENST00000354241 SLURP2P0DP57 97 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 AKR1B1P15121 316 aa23.9■■□□□ 1.42
TRIM4-202ENST00000354241 SPDYE2Q495Y8 402 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms