RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SMYD4Q8IYR2 804 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 HAUS7Q99871 368 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 SELENOOQ9BVL4 669 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 LRP5O75197 1615 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 MFAP3LO75121 409 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 SCP2P22307 547 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 HOXC9P31274 260 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 KRT9P35527 623 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 KCTD16Q68DU8 428 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 TMTC1Q8IUR5 882 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 MMS19Q96T76 1030 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 SAR1BQ9Y6B6 198 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 FRMD3A2A2Y4 597 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PTCD1O75127 700 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PPP6R2O75170 966 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 IPO7O95373 1038 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 FXR1P51114 621 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 GSCP56915 257 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PDCLQ13371 301 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 RASGRP2Q7LDG7 609 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 HELLSQ9NRZ9 838 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 TFR2Q9UP52 801 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 FAM208AQ9UK61 1670 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 NEBLO76041 1014 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 CASP1P29466 404 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 IARSP41252 1262 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 KCNV1Q6PIU1 500 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 NRKQ7Z2Y5 1582 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 NCOA7Q8NI08 942 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 N4BP2L2Q92802 583 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 VIPAS39Q9H9C1 493 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 GNL3LQ9NVN8 582 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 HPSEQ9Y251 543 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 ZNF213O14771 459 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 KIF1CO43896 1103 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PRPF6O94906 941 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 ACTN3Q08043 901 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 WDR93Q6P2C0 686 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 PLPPR3Q6T4P5 718 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 CYP26C1Q6V0L0 522 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 B4GALNT4Q76KP1 1039 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 MSL3Q8N5Y2 521 aaKnown RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 STAMQ92783 540 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 MYL10Q9BUA6 226 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 SLC26A6Q9BXS9 759 aa8.61□□□□□ -1.03
BRCA1-201ENST00000352993 RGS17Q9UGC6 210 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-201ENST00000352993 ATP2C2O75185 946 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 CDKL5O76039 1030 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 ZNF18P17022 549 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 PLCD1P51178 756 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 NOC3LQ8WTT2 800 aaKnown RBP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 AIDAQ96BJ3 306 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 CTAGE1Q96RT6 745 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 A0A1B0GTH6 734 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 RNF113AO15541 343 aaKnown RBP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 ATP1A1P05023 1023 aaKnown RBP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 HOXB7P09629 217 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 GRIN1Q05586 938 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 CKAP4Q07065 602 aaKnown RBP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 C2orf54Q08AI8 447 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 SLC24A3Q9HC58 644 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 TAB2Q9NYJ8 693 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 MAST3O60307 1309 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 EIF3HO15372 352 aaKnown RBP eCLIP8.6□□□□□ -1.03
BRCA1-201ENST00000352993 OPA1O60313 960 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 A1BGP04217 495 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 NEDD9Q14511 834 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 LRCH2Q5VUJ6 765 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 JAKMIP2Q96AA8 810 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 PSMB7Q99436 277 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 VEZTQ9HBM0 779 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 ODF2LQ9ULJ1 636 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 CTNND2Q9UQB3 1225 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 OVOS2A0A0J9YW53 1432 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 OVOS2Q6IE36 1432 aa8.6□□□□□ -1.03
BRCA1-201ENST00000352993 MACROD2A1Z1Q3 448 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 M0R2C6 588 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 ZNF185O15231 689 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 HSF2BPO75031 334 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 AARSP49588 968 aaKnown RBP eCLIP8.59□□□□□ -1.03
BRCA1-201ENST00000352993 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
BRCA1-201ENST00000352993 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 MICALCLQ6ZW33 695 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 COPS6Q7L5N1 327 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 XAGE3Q8WTP9 111 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 CHP1Q99653 195 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 AGXT2Q9BYV1 514 aa8.59□□□□□ -1.03
BRCA1-201ENST00000352993 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms