RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 DPF2Q92785 391 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 TMEM87BQ96K49 555 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 GGA1Q9UJY5 639 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 PDIA4P13667 645 aaKnown RBP11.92□□□□□ -0.5
SMPD4-201ENST00000351288 LONRF3Q496Y0 759 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-201ENST00000351288 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
SMPD4-201ENST00000351288 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-201ENST00000351288 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 TERF1P54274 439 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 UBE4AQ14139 1066 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-201ENST00000351288 NWD2Q9ULI1 1742 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 MAPK8IP1Q9UQF2 711 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 CDC25AP30304 524 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 SOGA3Q5TF21 947 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-201ENST00000351288 KIAA0825Q8IV33 1275 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 HOOK1Q9UJC3 728 aaKnown RBP11.91□□□□□ -0.5
SMPD4-201ENST00000351288 TRPC5Q9UL62 973 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-201ENST00000351288 CCDC194A0A1B0GVG4 234 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 CTAGE5O15320 804 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 CACNB3P54284 484 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 NOM1Q5C9Z4 860 aaKnown RBP11.91□□□□□ -0.5
SMPD4-201ENST00000351288 PIK3AP1Q6ZUJ8 805 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 NBPF11Q86T75 865 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 EEF2KMTQ96G04 330 aa11.91□□□□□ -0.5
SMPD4-201ENST00000351288 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 BSDC1Q9NW68 430 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-201ENST00000351288 ZMYM6O95789 1325 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 TMEM232C9JQI7 657 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 LDHCP07864 332 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
SMPD4-201ENST00000351288 USP17L3A6NCW0 530 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 USP17L4A6NCW7 530 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 POLR2DO15514 142 aaKnown RBP11.9□□□□□ -0.51
SMPD4-201ENST00000351288 CLSTN1O94985 981 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.51
SMPD4-201ENST00000351288 CCDC112Q8NEF3 446 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.51
SMPD4-201ENST00000351288 PLEKHA8P1O95397 391 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 PTPN14Q15678 1187 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
SMPD4-201ENST00000351288 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 TPM3P06753 285 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 ERCC3P19447 782 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMPD4-201ENST00000351288 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
SMPD4-201ENST00000351288 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 NTRK3Q16288 839 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 FANCLQ9NW38 375 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
SMPD4-201ENST00000351288 CCZ1BP86790 482 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 CCZ1P86791 482 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 ZSCAN10Q96SZ4 725 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 SMYD4Q8IYR2 804 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 LRRN4CLQ8ND94 238 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 ZHX1Q9UKY1 873 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 ZNF215Q9UL58 517 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 BTDP43251 543 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 EVCP57679 992 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 VPS72Q15906 364 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
SMPD4-201ENST00000351288 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
SMPD4-201ENST00000351288 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 YEATS4O95619 227 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 FANCCQ00597 558 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 SYT10Q6XYQ8 523 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 METTL16Q86W50 562 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms