RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 PRDM1O75626 825 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 DNAI2Q9GZS0 605 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
SMAD9-201ENST00000350148 JAK2O60674 1132 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 ADCY7P51828 1080 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 MYSM1Q5VVJ2 828 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 IQCEQ6IPM2 695 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
SMAD9-201ENST00000350148 PPFIA3O75145 1194 aa13.77□□□□□ -0.2
SMAD9-201ENST00000350148 PUS7LQ9H0K6 701 aaKnown RBP13.77□□□□□ -0.2
SMAD9-201ENST00000350148 CETN1Q12798 172 aa13.77□□□□□ -0.2
SMAD9-201ENST00000350148 PNPLA7Q6ZV29 1317 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
SMAD9-201ENST00000350148 KCNQ2O43526 872 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 HSPA1LP34931 641 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 ADALQ6DHV7 355 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 SDR42E1Q8WUS8 393 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 BIN1O00499 593 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 BCL9O00512 1426 aa13.77□□□□□ -0.21
SMAD9-201ENST00000350148 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 MYO3BQ8WXR4 1341 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 MTIF2P46199 727 aaKnown RBP13.76□□□□□ -0.21
SMAD9-201ENST00000350148 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
SMAD9-201ENST00000350148 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.76□□□□□ -0.21
SMAD9-201ENST00000350148 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 SLC1A4P43007 532 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 SCRN1Q12765 414 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
SMAD9-201ENST00000350148 IDEP14735 1019 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 MCM7P33993 719 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
SMAD9-201ENST00000350148 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 DHX58Q96C10 678 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 KCNH3Q9ULD8 1083 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 NTSR2O95665 410 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 TSC1Q92574 1164 aa13.76□□□□□ -0.21
SMAD9-201ENST00000350148 CYP2E1P05181 493 aaPredicted RBP13.75□□□□□ -0.21
SMAD9-201ENST00000350148 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 LCORLQ8N3X6 602 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 CDR1P51861 262 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 SPA17Q15506 151 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 DCAF15Q66K64 600 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 NSUN7Q8NE18 718 aaKnown RBP13.75□□□□□ -0.21
SMAD9-201ENST00000350148 TTC14Q96N46 770 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
SMAD9-201ENST00000350148 ODF2Q5BJF6 829 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
SMAD9-201ENST00000350148 HAUS3Q68CZ6 603 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 ZNF609O15014 1411 aa13.75□□□□□ -0.21
SMAD9-201ENST00000350148 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 IFNAR1P17181 557 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 MECOMQ03112 1051 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 ARHGAP29Q52LW3 1261 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 USP37Q86T82 979 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 H7C1D1 291 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 MMP10P09238 476 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 SCG2P13521 617 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 PHKBQ93100 1093 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 UBASH3AP57075 661 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 PODNQ7Z5L7 613 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 ASIC1P78348 528 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 NFIXQ14938 502 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 SLC10A5Q5PT55 438 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 CACNA2D4Q7Z3S7 1137 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms