RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 IGDCC4Q8TDY8 1250 aa31.9■■■□□ 2.7
SSBP4-202ENST00000348495 TMEM87BQ96K49 555 aa31.9■■■□□ 2.7
SSBP4-202ENST00000348495 TRIM34Q9BYJ4 488 aa31.9■■■□□ 2.7
SSBP4-202ENST00000348495 NBPF12Q5TAG4 269 aaPredicted RBP31.89■■■□□ 2.7
SSBP4-202ENST00000348495 SULF1Q8IWU6 871 aa31.89■■■□□ 2.7
SSBP4-202ENST00000348495 TSPY2A6NKD2 308 aa31.89■■■□□ 2.69
SSBP4-202ENST00000348495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.89■■■□□ 2.69
SSBP4-202ENST00000348495 NMRK2Q9NPI5 230 aa31.89■■■□□ 2.69
SSBP4-202ENST00000348495 PLIN4Q96Q06 1357 aa31.88■■■□□ 2.69
SSBP4-202ENST00000348495 NEDD1Q8NHV4 660 aa31.88■■■□□ 2.69
SSBP4-202ENST00000348495 TBC1D2Q9BYX2 928 aa31.88■■■□□ 2.69
SSBP4-202ENST00000348495 GPHNQ9NQX3 736 aaPredicted RBP31.88■■■□□ 2.69
SSBP4-202ENST00000348495 SH2B2O14492 632 aaPredicted RBP31.87■■■□□ 2.69
SSBP4-202ENST00000348495 MCM2P49736 904 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 ANKRD1Q15327 319 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 KRT26Q7Z3Y9 468 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 CCDC17Q96LX7 622 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 ZSCAN10Q96SZ4 725 aaPredicted RBP31.87■■■□□ 2.69
SSBP4-202ENST00000348495 ZKSCAN3Q9BRR0 538 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 TCP11L1Q9NUJ3 509 aa31.87■■■□□ 2.69
SSBP4-202ENST00000348495 ADM5C9JUS6 153 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 POTEIP0CG38 1075 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 POTEJP0CG39 1038 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 TSPY3P0CV98 308 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 TSPY8P0CW00 308 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 AKR1B1P15121 316 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 PRAMEF18Q5VWM3 479 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 MIGA2Q7L4E1 593 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 IQCA1Q86XH1 822 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.86■■■□□ 2.69
SSBP4-202ENST00000348495 IL17RBQ9NRM6 502 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 GREB1LQ9C091 1923 aaPredicted RBP31.86■■■□□ 2.69
SSBP4-202ENST00000348495 SEC23AQ15436 765 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 UBAC1Q9BSL1 405 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 ANGEL1Q9UNK9 670 aaKnown RBP31.86■■■□□ 2.69
SSBP4-202ENST00000348495 SSC5DA1L4H1 1573 aa31.86■■■□□ 2.69
SSBP4-202ENST00000348495 IFIT3O14879 490 aaKnown RBP31.85■■■□□ 2.69
SSBP4-202ENST00000348495 RRP1BQ14684 758 aaKnown RBP31.85■■■□□ 2.69
SSBP4-202ENST00000348495 CERKLQ49MI3 558 aaPredicted RBP31.85■■■□□ 2.69
SSBP4-202ENST00000348495 BRF1Q92994 677 aa31.85■■■□□ 2.69
SSBP4-202ENST00000348495 HOOK2Q96ED9 719 aa31.85■■■□□ 2.69
SSBP4-202ENST00000348495 LY9Q9HBG7 655 aa31.85■■■□□ 2.69
SSBP4-202ENST00000348495 TNKSO95271 1327 aa31.84■■■□□ 2.69
SSBP4-202ENST00000348495 NMT2O60551 498 aa31.84■■■□□ 2.69
SSBP4-202ENST00000348495 EVCP57679 992 aa31.84■■■□□ 2.69
SSBP4-202ENST00000348495 FGD1P98174 961 aa31.84■■■□□ 2.69
SSBP4-202ENST00000348495 SART3Q15020 963 aaKnown RBP31.84■■■□□ 2.69
SSBP4-202ENST00000348495 TMEM67Q5HYA8 995 aa31.84■■■□□ 2.69
SSBP4-202ENST00000348495 LIFRP42702 1097 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 ENAHQ8N8S7 591 aaPredicted RBP31.83■■■□□ 2.69
SSBP4-202ENST00000348495 ZNF526Q8TF50 670 aaPredicted RBP31.83■■■□□ 2.69
SSBP4-202ENST00000348495 IGKV6D-41A0A0C4DH26 115 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 PHF20L1A8MW92 1017 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 SUPT20HL1Q3ZLR7 823 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 DLK2Q6UY11 383 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 USP48Q86UV5 1035 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 SGMS1Q86VZ5 419 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 HSCBQ8IWL3 235 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 LARP6Q9BRS8 491 aaKnown RBP31.83■■■□□ 2.69
SSBP4-202ENST00000348495 SENP2Q9HC62 589 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 TPCN1Q9ULQ1 816 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 LIMCH1Q9UPQ0 1083 aa31.83■■■□□ 2.69
SSBP4-202ENST00000348495 CDC37L1Q7L3B6 337 aa31.82■■■□□ 2.68
SSBP4-202ENST00000348495 K7ELQ4 463 aaPredicted RBP31.81■■■□□ 2.68
SSBP4-202ENST00000348495 NOVP48745 357 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 DCAF15Q66K64 600 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 RCSD1Q6JBY9 416 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 NOL8Q76FK4 1167 aaKnown RBP31.81■■■□□ 2.68
SSBP4-202ENST00000348495 LDHDQ86WU2 507 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 ANKS1AQ92625 1134 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 CLEC11AQ9Y240 323 aa31.81■■■□□ 2.68
SSBP4-202ENST00000348495 ERICH2A1L162 156 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 BECN1Q14457 450 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 CCDC178Q5BJE1 867 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 JAG1P78504 1218 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 WTAPQ15007 396 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 SHROOM1Q2M3G4 852 aaPredicted RBP31.8■■■□□ 2.68
SSBP4-202ENST00000348495 DGKHQ86XP1 1220 aa31.8■■■□□ 2.68
SSBP4-202ENST00000348495 GLIS2Q9BZE0 524 aaPredicted RBP31.8■■■□□ 2.68
SSBP4-202ENST00000348495 APOBRQ0VD83 1088 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 ABCB5Q2M3G0 1257 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 TMTC2Q8N394 836 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 CEP95Q96GE4 821 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 TMX3Q96JJ7 454 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 BRPF3Q9ULD4 1205 aa31.79■■■□□ 2.68
SSBP4-202ENST00000348495 GDF11O95390 407 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 CDCA5Q96FF9 252 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 ZNF112Q9UJU3 913 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 GUCY1A2P33402 732 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 MAP1SQ66K74 1059 aaPredicted RBP31.78■■■□□ 2.68
SSBP4-202ENST00000348495 TMEM179Q6ZVK1 233 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 ZNF341Q9BYN7 854 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 MTMR4Q9NYA4 1195 aa31.78■■■□□ 2.68
SSBP4-202ENST00000348495 MPHOSPH10O00566 681 aaKnown RBP31.77■■■□□ 2.68
SSBP4-202ENST00000348495 LARGE1O95461 756 aa31.77■■■□□ 2.68
SSBP4-202ENST00000348495 CAP2P40123 477 aa31.77■■■□□ 2.68
SSBP4-202ENST00000348495 ME3Q16798 604 aa31.77■■■□□ 2.68
SSBP4-202ENST00000348495 ZSCAN31Q96LW9 406 aaPredicted RBP31.77■■■□□ 2.68
SSBP4-202ENST00000348495 IFIT1BQ5T764 474 aaKnown RBP31.76■■■□□ 2.67
SSBP4-202ENST00000348495 ZNF274Q96GC6 653 aaPredicted RBP31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms