RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 IGSF22Q8N9C0 903 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RIPOR2Q9Y4F9 1068 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ANKRD18BA2A2Z9 1011 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PDE6AP16499 860 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SPAG1Q07617 926 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 LDHAL6AQ6ZMR3 332 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TMTC1Q8IUR5 882 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ANKRD20A12PQ8NF67 263 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 NEK11Q8NG66 645 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 IQSEC3Q9UPP2 1182 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RXRAP19793 462 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MCM3P25205 808 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RAD51AP2Q09MP3 1159 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MFSD6Q6ZSS7 791 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 GSDMAQ96QA5 445 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TNS2Q63HR2 1409 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MFAP3LO75121 409 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 KIF4BQ2VIQ3 1234 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ADAM21Q9UKJ8 722 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FOXN1O15353 648 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FECHP22830 423 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TOB1P50616 345 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MAP3K12Q12852 859 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 WTAPQ15007 396 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 HSP90B2PQ58FF3 399 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 DESI2Q9BSY9 194 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MRPL44Q9H9J2 332 aaKnown RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SAMSN1Q9NSI8 373 aaKnown RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 AKAP17AQ02040 695 aaKnown RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RTL9Q8NET4 1388 aa11.49□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTAGE15A4D2H0 777 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTAGE8P0CG41 777 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ACTN2P35609 894 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PBX1P40424 430 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ST5P78524 1137 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CDKAL1Q5VV42 579 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PI16Q6UXB8 463 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTAGE6Q86UF2 777 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTAGE4Q8IX94 777 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 IFNL3Q8IZI9 196 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ADD3Q9UEY8 706 aaKnown RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MYH3P11055 1940 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 DCCP43146 1447 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RBL2Q08999 1139 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 HSP90AA4PQ58FG1 418 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZNF569Q5MCW4 686 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 BEND6Q5SZJ8 279 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 BRMS1Q9HCU9 246 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 LZTFL1Q9NQ48 299 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZSWIM5Q9P217 1185 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TCRBV5S4A2TA0A5A2 114 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ATF3P18847 181 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ITGA6P23229 1130 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 LMAN1P49257 510 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MED4Q9NPJ6 270 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PDE8BO95263 885 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 GTF2E1P29083 439 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 EPC1Q9H2F5 836 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ARAP2Q8WZ64 1704 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RPS6KA5O75582 802 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CUL4BQ13620 913 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms