RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 AGTPBP1Q9UPW5 1226 aa22.78■■□□□ 1.24
CCDC78-202ENST00000345165 MYH8P13535 1937 aa22.78■■□□□ 1.24
CCDC78-202ENST00000345165 POLR3DP05423 398 aaPredicted RBP22.77■■□□□ 1.24
CCDC78-202ENST00000345165 GNAT2P19087 354 aa22.77■■□□□ 1.24
CCDC78-202ENST00000345165 PLCD1P51178 756 aa22.77■■□□□ 1.24
CCDC78-202ENST00000345165 PDE1AP54750 535 aa22.77■■□□□ 1.24
CCDC78-202ENST00000345165 SDR42E1Q8WUS8 393 aa22.77■■□□□ 1.24
CCDC78-202ENST00000345165 PUS7LQ9H0K6 701 aaKnown RBP22.77■■□□□ 1.24
CCDC78-202ENST00000345165 TRIM75PA6NK02 468 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 C19orf81C9J6K1 198 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 GNRH1P01148 92 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 NUCB1Q02818 461 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 FBXO46Q6PJ61 603 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-202ENST00000345165 C17orf99Q6UX52 265 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 AMOTL1Q8IY63 956 aa22.76■■□□□ 1.23
CCDC78-202ENST00000345165 STRBPQ96SI9 672 aaKnown RBP22.76■■□□□ 1.23
CCDC78-202ENST00000345165 SHMT1P34896 483 aa22.75■■□□□ 1.23
CCDC78-202ENST00000345165 BACE1P56817 501 aa22.75■■□□□ 1.23
CCDC78-202ENST00000345165 SPP2Q13103 211 aa22.75■■□□□ 1.23
CCDC78-202ENST00000345165 PABPC4Q13310 644 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCDC78-202ENST00000345165 OSBPL3Q9H4L5 887 aa22.75■■□□□ 1.23
CCDC78-202ENST00000345165 ARPP21Q9UBL0 812 aaPredicted RBP22.75■■□□□ 1.23
CCDC78-202ENST00000345165 PNMA3Q9UL41 463 aa22.75■■□□□ 1.23
CCDC78-202ENST00000345165 CERKLQ49MI3 558 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-202ENST00000345165 OTOP1Q7RTM1 612 aa22.74■■□□□ 1.23
CCDC78-202ENST00000345165 CHD1LQ86WJ1 897 aa22.74■■□□□ 1.23
CCDC78-202ENST00000345165 OSBP2Q969R2 916 aa22.74■■□□□ 1.23
CCDC78-202ENST00000345165 EVI5LQ96CN4 794 aa22.74■■□□□ 1.23
CCDC78-202ENST00000345165 IGHDP01880 384 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 SLFNL1Q499Z3 407 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 SBK1Q52WX2 424 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 C12orf60Q5U649 245 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-202ENST00000345165 SLC4A4Q9Y6R1 1079 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 HTTP42858 3142 aa22.73■■□□□ 1.23
CCDC78-202ENST00000345165 USP17L10C9JJH3 530 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 PRKAB2O43741 272 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 GDF11O95390 407 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 CHGBP05060 677 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 JAG1P78504 1218 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 LACTBP83111 547 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-202ENST00000345165 ABCB5Q2M3G0 1257 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 GADL1Q6ZQY3 521 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 FSD1Q9BTV5 496 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 CABP5Q9NP86 173 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
CCDC78-202ENST00000345165 GPAA1O43292 621 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 GH2P01242 217 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 BCRP11274 1271 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 HOXA7P31268 230 aaPredicted RBP22.71■■□□□ 1.23
CCDC78-202ENST00000345165 KIF22Q14807 665 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 ZMYM1Q5SVZ6 1142 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 CCDC84Q86UT8 332 aaPredicted RBP22.71■■□□□ 1.23
CCDC78-202ENST00000345165 CD99L2Q8TCZ2 262 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 C12orf42Q96LP6 360 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 CCDC17Q96LX7 622 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 LNPKQ9C0E8 428 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 EFCC1Q9HA90 598 aa22.71■■□□□ 1.23
CCDC78-202ENST00000345165 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 USP17L12C9JPN9 530 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 USP17L21D6R901 530 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 HMGCS2P54868 508 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 PRMT2P55345 433 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 MTMR2Q13614 643 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 SLC4A8Q2Y0W8 1093 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 C16orf86Q6ZW13 317 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 KIAA1683Q9H0B3 1180 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 TRIM17Q9Y577 477 aa22.7■■□□□ 1.22
CCDC78-202ENST00000345165 GCLCP48506 637 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-202ENST00000345165 USP14P54578 494 aa22.69■■□□□ 1.22
CCDC78-202ENST00000345165 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
CCDC78-202ENST00000345165 TMEM179Q6ZVK1 233 aa22.69■■□□□ 1.22
CCDC78-202ENST00000345165 TMOD4Q9NZQ9 345 aa22.69■■□□□ 1.22
CCDC78-202ENST00000345165 HPS5Q9UPZ3 1129 aa22.69■■□□□ 1.22
CCDC78-202ENST00000345165 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-202ENST00000345165 MGAMO43451 1857 aa22.68■■□□□ 1.22
CCDC78-202ENST00000345165 TREML2Q5T2D2 321 aa22.68■■□□□ 1.22
CCDC78-202ENST00000345165 PTPN22Q9Y2R2 807 aa22.68■■□□□ 1.22
CCDC78-202ENST00000345165 PATL2C9JE40 543 aaKnown RBP22.67■■□□□ 1.22
CCDC78-202ENST00000345165 CYP2C8P10632 490 aa22.67■■□□□ 1.22
CCDC78-202ENST00000345165 FAM110CQ1W6H9 321 aa22.67■■□□□ 1.22
CCDC78-202ENST00000345165 SHROOM1Q2M3G4 852 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-202ENST00000345165 USP17L2Q6R6M4 530 aa22.67■■□□□ 1.22
CCDC78-202ENST00000345165 PLEKHM2Q8IWE5 1019 aa22.67■■□□□ 1.22
CCDC78-202ENST00000345165 SMCR8Q8TEV9 937 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-202ENST00000345165 GTF3C2Q8WUA4 911 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-202ENST00000345165 M0R2C6 588 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 CYP2D6P10635 497 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 OSBPP22059 807 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 GUCY1A2P33402 732 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 NACAP1Q9BZK3 213 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 HELLSQ9NRZ9 838 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 CPA4Q9UI42 421 aa22.66■■□□□ 1.22
CCDC78-202ENST00000345165 CDK8P49336 464 aa22.65■■□□□ 1.22
CCDC78-202ENST00000345165 RAB3GAP1Q15042 981 aa22.65■■□□□ 1.22
CCDC78-202ENST00000345165 ASCC2Q9H1I8 757 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-202ENST00000345165 ZNF287Q9HBT7 754 aa22.65■■□□□ 1.22
CCDC78-202ENST00000345165 RBBP6Q7Z6E9 1792 aaKnown RBP22.65■■□□□ 1.22
CCDC78-202ENST00000345165 CAP1Q01518 475 aa22.64■■□□□ 1.21
CCDC78-202ENST00000345165 B4GALNT3Q6L9W6 998 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms