RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ADGRA1Q86SQ6 560 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 TRMT44Q8IYL2 757 aaKnown RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 CLASRPQ8N2M8 674 aaKnown RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 MAGEB6Q8N7X4 407 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 PAK6Q9NQU5 681 aaPredicted RBP15.11■□□□□ 0.01
SGCA-202ENST00000344627 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 MAST2Q6P0Q8 1798 aa15.11■□□□□ 0.01
SGCA-202ENST00000344627 ZSWIM8A7E2V4 1837 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 FARP2O94887 1054 aaPredicted RBP15.1■□□□□ 0.01
SGCA-202ENST00000344627 INHAP05111 366 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 HLA-DOAP06340 250 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 USP5P45974 858 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 BACE1P56817 501 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 ANKRD13CQ8N6S4 541 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 MIGA1Q8NAN2 632 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 ANTXR1Q9H6X2 564 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 MORF4L1Q9UBU8 362 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
SGCA-202ENST00000344627 PHIPQ8WWQ0 1821 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 TFRCP02786 760 aaKnown RBP15.09■□□□□ 0.01
SGCA-202ENST00000344627 SOCS4Q8WXH5 440 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
SGCA-202ENST00000344627 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 PALD1Q9ULE6 856 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 FLT1P17948 1338 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 PTPRFP10586 1907 aa15.09■□□□□ 0.01
SGCA-202ENST00000344627 RAB11FIP3O75154 756 aa15.08■□□□□ 0
SGCA-202ENST00000344627 HMGCRP04035 888 aa15.08■□□□□ 0
SGCA-202ENST00000344627 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
SGCA-202ENST00000344627 HMGCS2P54868 508 aa15.08■□□□□ 0
SGCA-202ENST00000344627 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
SGCA-202ENST00000344627 TREML2Q5T2D2 321 aa15.08■□□□□ 0
SGCA-202ENST00000344627 UNC93B1Q9H1C4 597 aa15.08■□□□□ 0
SGCA-202ENST00000344627 ASCC2Q9H1I8 757 aaPredicted RBP15.08■□□□□ 0
SGCA-202ENST00000344627 MYH1P12882 1939 aa15.07■□□□□ 0
SGCA-202ENST00000344627 USP17L10C9JJH3 530 aa15.07■□□□□ 0
SGCA-202ENST00000344627 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
SGCA-202ENST00000344627 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
SGCA-202ENST00000344627 C20orf194Q5TEA3 1177 aa15.07■□□□□ 0
SGCA-202ENST00000344627 NECAB2Q7Z6G3 386 aa15.07■□□□□ 0
SGCA-202ENST00000344627 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
SGCA-202ENST00000344627 HMX1Q9NP08 348 aaPredicted RBP15.07■□□□□ 0
SGCA-202ENST00000344627 RPTORQ8N122 1335 aa15.07■□□□□ 0
SGCA-202ENST00000344627 FOCADQ5VW36 1801 aa15.06■□□□□ 0
SGCA-202ENST00000344627 GOLIM4O00461 696 aa15.06■□□□□ 0
SGCA-202ENST00000344627 EVI5O60447 810 aa15.06■□□□□ 0
SGCA-202ENST00000344627 MAPK4P31152 587 aa15.06■□□□□ 0
SGCA-202ENST00000344627 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
SGCA-202ENST00000344627 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
SGCA-202ENST00000344627 DEFB118Q96PH6 123 aa15.06■□□□□ 0
SGCA-202ENST00000344627 GJD2Q9UKL4 321 aa15.06■□□□□ 0
SGCA-202ENST00000344627 MGAMO43451 1857 aa15.06■□□□□ 0
SGCA-202ENST00000344627 GDF11O95390 407 aa15.05■□□□□ -0
SGCA-202ENST00000344627 ELNP15502 786 aa15.05■□□□□ -0
SGCA-202ENST00000344627 USP14P54578 494 aa15.05■□□□□ -0
SGCA-202ENST00000344627 PDE3AQ14432 1141 aa15.05■□□□□ -0
SGCA-202ENST00000344627 SLC9C2Q5TAH2 1124 aa15.05■□□□□ -0
SGCA-202ENST00000344627 TTC6Q86TZ1 520 aa15.05■□□□□ -0
SGCA-202ENST00000344627 NUDT12Q9BQG2 462 aa15.05■□□□□ -0
SGCA-202ENST00000344627 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ -0
SGCA-202ENST00000344627 EHD4Q9H223 541 aa15.05■□□□□ -0
SGCA-202ENST00000344627 MAGEB6P1A0A0J9YX57 407 aa15.04■□□□□ -0
SGCA-202ENST00000344627 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
SGCA-202ENST00000344627 MTMR2Q13614 643 aa15.04■□□□□ -0
SGCA-202ENST00000344627 USP17L2Q6R6M4 530 aa15.04■□□□□ -0
SGCA-202ENST00000344627 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
SGCA-202ENST00000344627 C12orf42Q96LP6 360 aa15.04■□□□□ -0
SGCA-202ENST00000344627 PRO3102Q9H379 93 aa15.04■□□□□ -0
SGCA-202ENST00000344627 BOLA2Q9H3K6 86 aa15.04■□□□□ -0
SGCA-202ENST00000344627 SIPA1L1O43166 1804 aa15.03■□□□□ -0
SGCA-202ENST00000344627 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
SGCA-202ENST00000344627 PDE6AP16499 860 aa15.03■□□□□ -0
SGCA-202ENST00000344627 HERVK_113P62684 666 aa15.03■□□□□ -0
SGCA-202ENST00000344627 CCNA1P78396 465 aa15.03■□□□□ -0
SGCA-202ENST00000344627 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
SGCA-202ENST00000344627 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
SGCA-202ENST00000344627 NBPF3Q9H094 633 aa15.03■□□□□ -0
SGCA-202ENST00000344627 RBM27Q9P2N5 1060 aaKnown RBP15.03■□□□□ -0
SGCA-202ENST00000344627 ZBTB21Q9ULJ3 1066 aa15.03■□□□□ -0
SGCA-202ENST00000344627 LOC285556D6RIA3 1793 aa15.03■□□□□ -0
SGCA-202ENST00000344627 DOCK3Q8IZD9 2030 aa15.02■□□□□ -0
SGCA-202ENST00000344627 ZNF532Q9HCE3 1301 aa15.02■□□□□ -0
SGCA-202ENST00000344627 SMARCA5O60264 1052 aaPredicted RBP15.02■□□□□ -0
SGCA-202ENST00000344627 JAG1P78504 1218 aa15.02■□□□□ -0
SGCA-202ENST00000344627 SHROOM1Q2M3G4 852 aaPredicted RBP15.02■□□□□ -0
SGCA-202ENST00000344627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.02■□□□□ -0
SGCA-202ENST00000344627 CRNKL1Q9BZJ0 848 aaKnown RBP15.02■□□□□ -0
SGCA-202ENST00000344627 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
SGCA-202ENST00000344627 DNAJC18Q9H819 358 aa15.02■□□□□ -0
SGCA-202ENST00000344627 SERPINB13Q9UIV8 391 aa15.02■□□□□ -0
SGCA-202ENST00000344627 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms