RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 DDX4Q9NQI0 724 aaKnown RBP22.34■■□□□ 1.17
CDHR4-201ENST00000343366 PI4KBQ9UBF8 816 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 A0A0C4DFX4 3053 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 APPP05067 770 aa22.33■■□□□ 1.17
CDHR4-201ENST00000343366 TMEM106CQ9BVX2 250 aa22.33■■□□□ 1.17
CDHR4-201ENST00000343366 TMEM39BQ9GZU3 492 aa22.33■■□□□ 1.17
CDHR4-201ENST00000343366 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.33■■□□□ 1.17
CDHR4-201ENST00000343366 ARPP21Q9UBL0 812 aaPredicted RBP22.33■■□□□ 1.17
CDHR4-201ENST00000343366 ZMYM6O95789 1325 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 SGSM2O43147 1006 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 ALX1Q15699 326 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 SLC9C1Q4G0N8 1177 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 KIAA1211Q6ZU35 1233 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 FOXP4Q8IVH2 680 aaPredicted RBP22.32■■□□□ 1.16
CDHR4-201ENST00000343366 FAM43AQ8N2R8 423 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.32■■□□□ 1.16
CDHR4-201ENST00000343366 SDR42E1Q8WUS8 393 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 DSCC1Q9BVC3 393 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
CDHR4-201ENST00000343366 HERC5Q9UII4 1024 aaKnown RBP22.32■■□□□ 1.16
CDHR4-201ENST00000343366 H0YGN5 161 aa22.31■■□□□ 1.16
CDHR4-201ENST00000343366 TBC1D12O60347 775 aa22.31■■□□□ 1.16
CDHR4-201ENST00000343366 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
CDHR4-201ENST00000343366 SBK1Q52WX2 424 aa22.31■■□□□ 1.16
CDHR4-201ENST00000343366 EHD4Q9H223 541 aa22.31■■□□□ 1.16
CDHR4-201ENST00000343366 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
CDHR4-201ENST00000343366 HSPD1P10809 573 aaKnown RBP22.3■■□□□ 1.16
CDHR4-201ENST00000343366 TDO2P48775 406 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 VGLL4Q14135 290 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 TAF1CQ15572 869 aaPredicted RBP22.3■■□□□ 1.16
CDHR4-201ENST00000343366 NBPF11Q86T75 865 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 IFNL3Q8IZI9 196 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 ESYT1Q9BSJ8 1104 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 NAPBQ9H115 298 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 CTNNA3Q9UI47 895 aa22.3■■□□□ 1.16
CDHR4-201ENST00000343366 CCL15-CCL14A0A0B4J2E2 113 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 PRKAB2O43741 272 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 MAP3K10Q02779 954 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 CCL15Q16663 113 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 ZNF589Q86UQ0 364 aaPredicted RBP22.29■■□□□ 1.16
CDHR4-201ENST00000343366 SHISA4Q96DD7 197 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 TRIM34Q9BYJ4 488 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 ZNF287Q9HBT7 754 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 ZFYVE28Q9HCC9 887 aa22.29■■□□□ 1.16
CDHR4-201ENST00000343366 BAZ2AQ9UIF9 1905 aaKnown RBP22.29■■□□□ 1.16
CDHR4-201ENST00000343366 DDTLA6NHG4 134 aaPredicted RBP22.28■■□□□ 1.16
CDHR4-201ENST00000343366 SLC3A2P08195 630 aaKnown RBP22.28■■□□□ 1.16
CDHR4-201ENST00000343366 GTF2A2P52657 109 aa22.28■■□□□ 1.16
CDHR4-201ENST00000343366 METTL16Q86W50 562 aaKnown RBP22.28■■□□□ 1.16
CDHR4-201ENST00000343366 ZFPM1Q8IX07 1006 aa22.28■■□□□ 1.16
CDHR4-201ENST00000343366 ARHGAP39Q9C0H5 1083 aa22.28■■□□□ 1.16
CDHR4-201ENST00000343366 PRO3102Q9H379 93 aa22.28■■□□□ 1.16
CDHR4-201ENST00000343366 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
CDHR4-201ENST00000343366 PALD1Q9ULE6 856 aa22.28■■□□□ 1.16
CDHR4-201ENST00000343366 SPDYE5A6NIY4 337 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 EPB41L2O43491 1005 aaKnown RBP22.27■■□□□ 1.16
CDHR4-201ENST00000343366 TLR2O60603 784 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 MAP3K9P80192 1104 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 ARHGEF6Q15052 776 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 C12orf60Q5U649 245 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 UBE2Q1Q7Z7E8 422 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
CDHR4-201ENST00000343366 ZNF341Q9BYN7 854 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 SWAP70Q9UH65 585 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 SERPINB13Q9UIV8 391 aa22.27■■□□□ 1.16
CDHR4-201ENST00000343366 USP17L12C9JPN9 530 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 USP17L21D6R901 530 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 REC8O95072 547 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 LACTBP83111 547 aaPredicted RBP22.26■■□□□ 1.15
CDHR4-201ENST00000343366 CTR9Q6PD62 1173 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 SH3BP5LQ7L8J4 393 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 SH3TC2Q8TF17 1288 aa22.26■■□□□ 1.15
CDHR4-201ENST00000343366 SAP30BPQ9UHR5 308 aaKnown RBP22.26■■□□□ 1.15
CDHR4-201ENST00000343366 NT5C2P49902 561 aa22.25■■□□□ 1.15
CDHR4-201ENST00000343366 SLC4A8Q2Y0W8 1093 aa22.25■■□□□ 1.15
CDHR4-201ENST00000343366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDHR4-201ENST00000343366 SNCAIPQ9Y6H5 919 aa22.25■■□□□ 1.15
CDHR4-201ENST00000343366 FGAP02671 866 aa22.24■■□□□ 1.15
CDHR4-201ENST00000343366 PCP11498 1178 aaKnown RBP22.24■■□□□ 1.15
CDHR4-201ENST00000343366 CTGFP29279 349 aa22.24■■□□□ 1.15
CDHR4-201ENST00000343366 EPB41L4AQ9HCS5 686 aaPredicted RBP22.24■■□□□ 1.15
CDHR4-201ENST00000343366 GINM1Q9NU53 330 aa22.24■■□□□ 1.15
CDHR4-201ENST00000343366 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
CDHR4-201ENST00000343366 GNRH1P01148 92 aa22.23■■□□□ 1.15
CDHR4-201ENST00000343366 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
CDHR4-201ENST00000343366 ANAPC4Q9UJX5 808 aa22.23■■□□□ 1.15
CDHR4-201ENST00000343366 ROBO3Q96MS0 1386 aa22.23■■□□□ 1.15
CDHR4-201ENST00000343366 BTBD19C9JJ37 291 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 PLCD1P51178 756 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 PDE4BQ07343 736 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 IMMTQ16891 758 aaKnown RBP22.22■■□□□ 1.15
CDHR4-201ENST00000343366 C17orf99Q6UX52 265 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 MAP4K1Q92918 833 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 RBM27Q9P2N5 1060 aaKnown RBP22.22■■□□□ 1.15
CDHR4-201ENST00000343366 ZNF112Q9UJU3 913 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 ADGRA2Q96PE1 1338 aa22.22■■□□□ 1.15
CDHR4-201ENST00000343366 MINDY4BA8MYZ0 360 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms