RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 LCORLQ8N3X6 602 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 SRRTQ9BXP5 876 aaKnown RBP18.53■□□□□ 0.56
RDX-201ENST00000343115 KCNF1Q9H3M0 494 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 SPATA31D1Q6ZQQ2 1576 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 USO1O60763 962 aaKnown RBP18.53■□□□□ 0.56
RDX-201ENST00000343115 ETF1P62495 437 aaKnown RBP18.53■□□□□ 0.56
RDX-201ENST00000343115 CHRNDQ07001 517 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 SPECC1LQ69YQ0 1117 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 TBC1D10CQ8IV04 446 aa18.53■□□□□ 0.56
RDX-201ENST00000343115 H0YHG0 523 aa18.52■□□□□ 0.56
RDX-201ENST00000343115 TNNI2P48788 182 aa18.52■□□□□ 0.56
RDX-201ENST00000343115 LUC7L2Q9Y383 392 aaKnown RBP18.52■□□□□ 0.56
RDX-201ENST00000343115 AMPD3Q01432 767 aa18.52■□□□□ 0.56
RDX-201ENST00000343115 KRT9P35527 623 aa18.52■□□□□ 0.55
RDX-201ENST00000343115 RASGRF1Q13972 1273 aa18.52■□□□□ 0.55
RDX-201ENST00000343115 PPP1R1BQ9UD71 204 aaPredicted RBP18.52■□□□□ 0.55
RDX-201ENST00000343115 USP27XA6NNY8 438 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 CDC25AP30304 524 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 DYNLL1P63167 89 aaKnown RBP18.51■□□□□ 0.55
RDX-201ENST00000343115 SMARCC1Q92922 1105 aaPredicted RBP18.51■□□□□ 0.55
RDX-201ENST00000343115 TSG101Q99816 390 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
RDX-201ENST00000343115 GNAQP50148 359 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 TFAP4Q01664 338 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
RDX-201ENST00000343115 CYB5R4Q7L1T6 521 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 PYM1Q9BRP8 204 aaKnown RBP18.51■□□□□ 0.55
RDX-201ENST00000343115 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 USP32Q8NFA0 1604 aa18.51■□□□□ 0.55
RDX-201ENST00000343115 SH2B2O14492 632 aaPredicted RBP18.5■□□□□ 0.55
RDX-201ENST00000343115 TECPR2O15040 1411 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 RABL6Q3YEC7 729 aaPredicted RBP18.5■□□□□ 0.55
RDX-201ENST00000343115 SLF1Q9BQI6 1058 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 TSPYL1Q9H0U9 437 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 FBXO3Q9UK99 471 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 RIMBP2O15034 1052 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 PAFAH1B1P43034 410 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 NCAPD2Q15021 1401 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 CNGA4Q8IV77 575 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 CSRNP2Q9H175 543 aa18.5■□□□□ 0.55
RDX-201ENST00000343115 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 TAF4BQ92750 862 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 RBM28Q9NW13 759 aaKnown RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 MAPKAPK5Q8IW41 473 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 PCDHB6Q9Y5E3 794 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 GPKOWQ92917 476 aaPredicted RBP eCLIP18.49■□□□□ 0.55
RDX-201ENST00000343115 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 MED23Q9ULK4 1368 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 FMR1NBQ8N0W7 255 aaPredicted RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 PPP1R13BQ96KQ4 1090 aa18.49■□□□□ 0.55
RDX-201ENST00000343115 STRBPQ96SI9 672 aaKnown RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 RTCBQ9Y3I0 505 aaKnown RBP18.49■□□□□ 0.55
RDX-201ENST00000343115 MACROD2A1Z1Q3 448 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 CASP1P29466 404 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 CYLC1P35663 651 aaPredicted RBP18.48■□□□□ 0.55
RDX-201ENST00000343115 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 PTGDRQ13258 359 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 CCDC122Q5T0U0 273 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 CCDC42Q96M95 316 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
RDX-201ENST00000343115 TUBB4AP04350 444 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 CDC27P30260 824 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 PPP2R2CQ9Y2T4 447 aa18.48■□□□□ 0.55
RDX-201ENST00000343115 WDHD1O75717 1129 aaPredicted RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 NOP2P46087 812 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 RPS8P62241 208 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 GOLGA8HP0CJ92 632 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 TXKP42681 527 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 MAP9Q49MG5 647 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 RASGRP4Q8TDF6 673 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 C6orf50Q9HD87 102 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 SAMSN1Q9NSI8 373 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 CALCOCO1Q9P1Z2 691 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 AP5Z1O43299 807 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 ST3GAL1Q11201 340 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 SIK1P57059 783 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 EXOSC10Q01780 885 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 PDE4DQ08499 809 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 PAK1Q13153 545 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 ODF2Q5BJF6 829 aa18.47■□□□□ 0.55
RDX-201ENST00000343115 SYMPKQ92797 1274 aaKnown RBP18.47■□□□□ 0.55
RDX-201ENST00000343115 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
RDX-201ENST00000343115 TEX11Q8IYF3 940 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 SUSD4Q5VX71 490 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
RDX-201ENST00000343115 EPSTI1Q96J88 318 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms