RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ATP10DQ9P241 1426 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 CFAP74Q9C0B2 1584 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 FAM107BQ9H098 131 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 TOM1O60784 492 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 CYP26C1Q6V0L0 522 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 GJB4Q9NTQ9 266 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 VPS18Q9P253 973 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 LRWD1Q9UFC0 647 aa8.09□□□□□ -1.12
VCAN-202ENST00000342785 HEG1Q9ULI3 1381 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 ADD2P35612 726 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 PPP1R2P41236 205 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 MAPKAPK5Q8IW41 473 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 PGBD1Q96JS3 809 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 IL25Q9H293 177 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 RSPH14Q9UHP6 348 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 UFL1O94874 794 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 LONRF3Q496Y0 759 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 TRIML1Q8N9V2 468 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 ZSCAN10Q96SZ4 725 aaPredicted RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 SETBP1Q9Y6X0 1596 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 CDC42BPBQ9Y5S2 1711 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 POTEJP0CG39 1038 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 IFNAR1P17181 557 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 GABPB1Q06547 395 aaPredicted RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 TRAF1Q13077 416 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 GOPCQ9HD26 462 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 CCNL1Q9UK58 526 aaPredicted RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 GOLGA6L7A0A1B0GV03 622 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 PSDA5PKW4 1024 aaPredicted RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 SPDYE3A6NKU9 549 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 CHRNDQ07001 517 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 DYDC1Q8WWB3 177 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 E9PCH4 1651 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 CROCC2H7BZ55 1655 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 IL6STP40189 918 aaPredicted RBP8.08□□□□□ -1.12
VCAN-202ENST00000342785 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 KRT25Q7Z3Z0 450 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 ANKARQ7Z5J8 1434 aa8.08□□□□□ -1.12
VCAN-202ENST00000342785 PRKAB2O43741 272 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 HDXQ7Z353 690 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 TTLL11Q8NHH1 800 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 HSF2BPO75031 334 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 SEPT7Q16181 437 aaKnown RBP8.07□□□□□ -1.12
VCAN-202ENST00000342785 NELFBQ8WX92 580 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 PPP2R2CQ9Y2T4 447 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 CHD1O14646 1710 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 PTPRMP28827 1452 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 IKBKBO14920 756 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 VAV2P52735 878 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 RNF187Q5TA31 235 aaPredicted RBP8.07□□□□□ -1.12
VCAN-202ENST00000342785 HS2ST1Q7LGA3 356 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 IQSEC2Q5JU85 1478 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 NR5A1Q13285 461 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 TUBB2AQ13885 445 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 TUBB2BQ9BVA1 445 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
VCAN-202ENST00000342785 LAMC1P11047 1609 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 CCDC172P0C7W6 258 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 ERCC3P19447 782 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 DDIT3P35638 169 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 RAPGEF1Q13905 1077 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 CNNM4Q6P4Q7 775 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 CTNNBL1Q8WYA6 563 aaPredicted RBP8.07□□□□□ -1.12
VCAN-202ENST00000342785 ZSWIM5Q9P217 1185 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 MED23Q9ULK4 1368 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 PPP6R2O75170 966 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 PTGDRQ13258 359 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 KIAA0753Q2KHM9 967 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 OR8K1Q8NGG5 319 aa8.07□□□□□ -1.12
VCAN-202ENST00000342785 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 SCG2P13521 617 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 MAGEA1P43355 309 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 SIK1P57059 783 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 SPATA1Q5VX52 437 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 CCNT1O60563 726 aaKnown RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 IVLP07476 585 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 LIFRP42702 1097 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 UBE4AQ14139 1066 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 DYMQ7RTS9 669 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 BLIDQ8IZY5 108 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 SNX29Q8TEQ0 813 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 TGFBRAP1Q8WUH2 860 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 PIH1D3Q9NQM4 214 aaKnown RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 SH2B2O14492 632 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 STX10O60499 249 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms