RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MMP1P03956 469 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 RASA1P20936 1047 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 GRIK5Q16478 980 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 SMYD5Q6GMV2 418 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 C4orf32Q8N8J7 132 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 TMEM174Q8WUU8 243 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 AIDAQ96BJ3 306 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 EYA3Q99504 573 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 KIF3AQ9Y496 699 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 MDM2Q00987 491 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 WASHC4Q2M389 1173 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 ZSCAN23Q3MJ62 389 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 SH3RF1Q7Z6J0 888 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 ARMT1Q9H993 441 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 SMC3Q9UQE7 1217 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 DAGLAQ9Y4D2 1042 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 CPA1P15085 419 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 MAD2L2Q9UI95 211 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 MRE11P49959 708 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 FKBP4Q02790 459 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 LINC00301Q8NCQ3 95 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 WASF1Q92558 559 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 ESR2Q92731 530 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 BRF1Q92994 677 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 PGBD1Q96JS3 809 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 TUBE1Q9UJT0 475 aa6.28□□□□□ -1.4
PRPF4B-201ENST00000337659 CYP7A1P22680 504 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 PRDX5P30044 214 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CDC25BP30305 580 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 SARM1Q6SZW1 724 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 TTC6Q86TZ1 520 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 USP48Q86UV5 1035 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CCDC83Q8IWF9 413 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 RTKN2Q8IZC4 609 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 KCTD17Q8N5Z5 321 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 SAMD3Q8N6K7 520 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 FAM184AQ8NB25 1140 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CLSTN2Q9H4D0 955 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CCDC9Q9Y3X0 531 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 SLC4A4Q9Y6R1 1079 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 DEXIO95424 95 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 YBX3P16989 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 PFKFB3Q16875 520 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CCDC183Q5T5S1 534 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 AGBL3Q8NEM8 1001 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 CCDC196A0A1B0GTZ2 297 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 PRKAB2O43741 272 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 POLD1P28340 1107 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 SARSP49591 514 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 SLC39A14Q15043 492 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 ECM1Q16610 540 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 RESP18Q5W5W9 173 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 FAM83AQ86UY5 434 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 DHX36Q9H2U1 1008 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 ZNF536O15090 1300 aa6.27□□□□□ -1.41
PRPF4B-201ENST00000337659 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 PRPHP41219 470 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 MFSD6Q6ZSS7 791 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 SLKQ9H2G2 1235 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 DDX19AQ9NUU7 478 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 IQSEC3Q9UPP2 1182 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 RPS12P25398 132 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 MOXD1Q6UVY6 613 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 GAS2L3Q86XJ1 694 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 ZNF654Q8IZM8 581 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 FANCBQ8NB91 859 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 USP25Q9UHP3 1055 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 YDJCA8MPS7 323 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 KIF28PB7ZC32 967 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 EDIL3O43854 480 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 JAK2O60674 1132 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 SHMT1P34896 483 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 TOB1P50616 345 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 GMCL1Q96IK5 515 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 NAPBQ9H115 298 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 DNAJC18Q9H819 358 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 NYAP2Q9P242 653 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 CFAP45Q9UL16 551 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 NSFL1CQ9UNZ2 370 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 TNKSO95271 1327 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 CTAGE5O15320 804 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 BAG3O95817 575 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 CMA1P23946 247 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 ARID5BQ14865 1188 aa6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-201ENST00000337659 PPP1R1BQ9UD71 204 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms