RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 PUM3Q15397 648 aaKnown RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 NCAPGQ9BPX3 1015 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 MED1Q15648 1581 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 KRT86O43790 486 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 EPS15P42566 896 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 KRT83P78385 493 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 MAATS1Q7Z4T9 603 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 SLC5A4Q9NY91 659 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 ITGA6P23229 1130 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 CHD2O14647 1828 aaKnown RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 CLNS1AP54105 237 aaKnown RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 MAP2K1Q02750 393 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 VPS33BQ9H267 617 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 TMOD4Q9NZQ9 345 aa12.43□□□□□ -0.42
LRAT-201ENST00000336356 CPSF2Q9P2I0 782 aaKnown RBP12.43□□□□□ -0.42
LRAT-201ENST00000336356 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 ANXA1P04083 346 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
LRAT-201ENST00000336356 LRCH2Q5VUJ6 765 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 ADAM21Q9UKJ8 722 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 MPHOSPH10O00566 681 aaKnown RBP12.42□□□□□ -0.42
LRAT-201ENST00000336356 ZEB2O60315 1214 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 MUM1L1Q5H9M0 696 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 CCDC43Q96MW1 224 aaKnown RBP12.42□□□□□ -0.42
LRAT-201ENST00000336356 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
LRAT-201ENST00000336356 CTSWP56202 376 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
LRAT-201ENST00000336356 FKBP15Q5T1M5 1219 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 VAV2P52735 878 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 PDE4BQ07343 736 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 IFFO1Q0D2I5 559 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 WHAMMP3Q1A5X7 153 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 RPAINQ86UA6 219 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 YY1AP1Q9H869 796 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 EHMT1Q9H9B1 1298 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 PPP2R2CQ9Y2T4 447 aa12.42□□□□□ -0.42
LRAT-201ENST00000336356 SEMA3EO15041 775 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 PYM1Q9BRP8 204 aaKnown RBP12.41□□□□□ -0.42
LRAT-201ENST00000336356 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.41□□□□□ -0.42
LRAT-201ENST00000336356 HLTFQ14527 1009 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRAT-201ENST00000336356 ME3Q16798 604 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 SCLT1Q96NL6 688 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 ABCC6O95255 1503 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 GOLGA6BA6NDN3 693 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 PLA2G4DQ86XP0 818 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
LRAT-201ENST00000336356 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 GCKRQ14397 625 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
LRAT-201ENST00000336356 VEGFAP15692 232 aaPredicted RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 LIG3P49916 1009 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 BIN2Q9UBW5 565 aaPredicted RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 HSP90AA4PQ58FG1 418 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 LPIN2Q92539 896 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 COA1Q9GZY4 146 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 C21orf2O43822 256 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 TACC1O75410 805 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
LRAT-201ENST00000336356 SPECC1Q5M775 1068 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRAT-201ENST00000336356 STAP2Q9UGK3 403 aa12.4□□□□□ -0.42
LRAT-201ENST00000336356 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.43
LRAT-201ENST00000336356 SLC27A2O14975 620 aa12.4□□□□□ -0.43
LRAT-201ENST00000336356 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.43
LRAT-201ENST00000336356 GNAT2P19087 354 aa12.4□□□□□ -0.43
LRAT-201ENST00000336356 CFAP58Q5T655 872 aa12.4□□□□□ -0.43
LRAT-201ENST00000336356 PODNQ7Z5L7 613 aa12.4□□□□□ -0.43
LRAT-201ENST00000336356 SP8Q8IXZ3 490 aa12.4□□□□□ -0.43
LRAT-201ENST00000336356 GOLIM4O00461 696 aa12.39□□□□□ -0.43
LRAT-201ENST00000336356 NFIXQ14938 502 aa12.39□□□□□ -0.43
LRAT-201ENST00000336356 WDR78Q5VTH9 848 aa12.39□□□□□ -0.43
LRAT-201ENST00000336356 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
LRAT-201ENST00000336356 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
LRAT-201ENST00000336356 CAPN7Q9Y6W3 813 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms