RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 ZNF579Q8NAF0 562 aaKnown RBP27■■□□□ 1.91
ITM2C-203ENST00000335005 CACTINQ8WUQ7 758 aaKnown RBP27■■□□□ 1.91
ITM2C-203ENST00000335005 CLIC6Q96NY7 704 aa27■■□□□ 1.91
ITM2C-203ENST00000335005 DCP1AQ9NPI6 582 aaPredicted RBP27■■□□□ 1.91
ITM2C-203ENST00000335005 USP21Q9UK80 565 aa27■■□□□ 1.91
ITM2C-203ENST00000335005 SMTNL1A8MU46 457 aa26.99■■□□□ 1.91
ITM2C-203ENST00000335005 TROAPQ12815 778 aa26.99■■□□□ 1.91
ITM2C-203ENST00000335005 AMIGO3Q86WK7 504 aa26.99■■□□□ 1.91
ITM2C-203ENST00000335005 FBXO2Q9UK22 296 aaPredicted RBP26.99■■□□□ 1.91
ITM2C-203ENST00000335005 USP17L12C9JPN9 530 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 USP17L21D6R901 530 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 GTF2F1P35269 517 aaKnown RBP eCLIP26.98■■□□□ 1.91
ITM2C-203ENST00000335005 NCAPHQ15003 741 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 PKN1Q16512 942 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 TFCP2L1Q9NZI6 479 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 ARPP21Q9UBL0 812 aaPredicted RBP26.98■■□□□ 1.91
ITM2C-203ENST00000335005 KCNH3Q9ULD8 1083 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 RRP9O43818 475 aaKnown RBP26.98■■□□□ 1.91
ITM2C-203ENST00000335005 XBP1P17861 261 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 SPTY2D1Q68D10 685 aaPredicted RBP26.98■■□□□ 1.91
ITM2C-203ENST00000335005 KRBA2Q6ZNG9 492 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 LRRC8AQ8IWT6 810 aa26.98■■□□□ 1.91
ITM2C-203ENST00000335005 NOL10Q9BSC4 688 aaKnown RBP26.98■■□□□ 1.91
ITM2C-203ENST00000335005 CMTR1Q8N1G2 835 aaKnown RBP26.97■■□□□ 1.91
ITM2C-203ENST00000335005 CEP131Q9UPN4 1083 aa26.97■■□□□ 1.91
ITM2C-203ENST00000335005 UBAP1LF5GYI3 381 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 PRDX5P30044 214 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 AKAP17AQ02040 695 aaKnown RBP26.96■■□□□ 1.91
ITM2C-203ENST00000335005 METTL16Q86W50 562 aaKnown RBP26.96■■□□□ 1.91
ITM2C-203ENST00000335005 SHISA4Q96DD7 197 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 PHF20Q9BVI0 1012 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 TPM4P67936 248 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 OSBPL5Q9H0X9 879 aaPredicted RBP26.96■■□□□ 1.91
ITM2C-203ENST00000335005 AATFQ9NY61 560 aaKnown RBP eCLIP26.96■■□□□ 1.91
ITM2C-203ENST00000335005 IMPACTQ9P2X3 320 aa26.96■■□□□ 1.91
ITM2C-203ENST00000335005 UBR3Q6ZT12 1888 aa26.95■■□□□ 1.91
ITM2C-203ENST00000335005 BIN1O00499 593 aa26.95■■□□□ 1.9
ITM2C-203ENST00000335005 NR5A1Q13285 461 aa26.95■■□□□ 1.9
ITM2C-203ENST00000335005 TMTC3Q6ZXV5 915 aa26.95■■□□□ 1.9
ITM2C-203ENST00000335005 CCDC82Q8N4S0 544 aa26.95■■□□□ 1.9
ITM2C-203ENST00000335005 LEMD3Q9Y2U8 911 aa26.95■■□□□ 1.9
ITM2C-203ENST00000335005 SRPRBQ9Y5M8 271 aaKnown RBP26.95■■□□□ 1.9
ITM2C-203ENST00000335005 GRAPQ13588 217 aa26.94■■□□□ 1.9
ITM2C-203ENST00000335005 C15orf52Q6ZUT6 534 aaKnown RBP26.94■■□□□ 1.9
ITM2C-203ENST00000335005 TXNRD3Q86VQ6 643 aa26.94■■□□□ 1.9
ITM2C-203ENST00000335005 GRAPLQ8TC17 118 aaPredicted RBP26.94■■□□□ 1.9
ITM2C-203ENST00000335005 OXER1Q8TDS5 423 aa26.94■■□□□ 1.9
ITM2C-203ENST00000335005 FBXW7Q969H0 707 aa26.94■■□□□ 1.9
ITM2C-203ENST00000335005 GSDMDP57764 484 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 MDM2Q00987 491 aaPredicted RBP26.93■■□□□ 1.9
ITM2C-203ENST00000335005 CHAF1AQ13111 956 aaPredicted RBP26.93■■□□□ 1.9
ITM2C-203ENST00000335005 LONRF3Q496Y0 759 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 FAM13BQ9NYF5 915 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 PCDHB6Q9Y5E3 794 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 NAV1Q8NEY1 1877 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 PRDM1O75626 825 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 TRAPPC3LQ5T215 181 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 CNNM3Q8NE01 707 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 TAOK2Q9UL54 1235 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 CNTNAP5Q8WYK1 1306 aa26.93■■□□□ 1.9
ITM2C-203ENST00000335005 MYO1BO43795 1136 aa26.92■■□□□ 1.9
ITM2C-203ENST00000335005 RFC4P35249 363 aa26.92■■□□□ 1.9
ITM2C-203ENST00000335005 PNOCQ13519 176 aa26.92■■□□□ 1.9
ITM2C-203ENST00000335005 HOOK1Q9UJC3 728 aaKnown RBP26.92■■□□□ 1.9
ITM2C-203ENST00000335005 PLEKHA8P1O95397 391 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 ADRA2BP18089 450 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 KRT2P35908 639 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 DHX8Q14562 1220 aaKnown RBP26.91■■□□□ 1.9
ITM2C-203ENST00000335005 CCDC24Q8N4L8 307 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 WDR66Q8TBY9 1149 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 MKRN1Q9UHC7 482 aaKnown RBP26.91■■□□□ 1.9
ITM2C-203ENST00000335005 ROBO3Q96MS0 1386 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 PDE4BQ07343 736 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 NFIXQ14938 502 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 NT5DC1Q5TFE4 455 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 HSD3B7Q9H2F3 369 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 KCND1Q9NSA2 647 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 CDK5RAP2Q96SN8 1893 aa26.91■■□□□ 1.9
ITM2C-203ENST00000335005 TNFRSF25Q93038 417 aa26.9■■□□□ 1.9
ITM2C-203ENST00000335005 VPS54Q9P1Q0 977 aa26.9■■□□□ 1.9
ITM2C-203ENST00000335005 BMP15O95972 392 aa26.89■■□□□ 1.9
ITM2C-203ENST00000335005 CCZ1BP86790 482 aa26.89■■□□□ 1.9
ITM2C-203ENST00000335005 CCZ1P86791 482 aaPredicted RBP26.89■■□□□ 1.9
ITM2C-203ENST00000335005 DZIP1Q86YF9 867 aaKnown RBP26.89■■□□□ 1.9
ITM2C-203ENST00000335005 FOXP4Q8IVH2 680 aaPredicted RBP26.89■■□□□ 1.9
ITM2C-203ENST00000335005 CABP5Q9NP86 173 aa26.89■■□□□ 1.9
ITM2C-203ENST00000335005 XDHP47989 1333 aa26.89■■□□□ 1.9
ITM2C-203ENST00000335005 MYL5Q02045 173 aa26.89■■□□□ 1.89
ITM2C-203ENST00000335005 GRIN1Q05586 938 aa26.89■■□□□ 1.89
ITM2C-203ENST00000335005 NPY5RQ15761 445 aa26.89■■□□□ 1.89
ITM2C-203ENST00000335005 XPO4Q9C0E2 1151 aaKnown RBP26.89■■□□□ 1.89
ITM2C-203ENST00000335005 PCDHA5Q9Y5H7 936 aa26.89■■□□□ 1.89
ITM2C-203ENST00000335005 V9GY48 417 aaPredicted RBP26.89■■□□□ 1.89
ITM2C-203ENST00000335005 TRIM75PA6NK02 468 aa26.88■■□□□ 1.89
ITM2C-203ENST00000335005 ONECUT3O60422 494 aaPredicted RBP26.88■■□□□ 1.89
ITM2C-203ENST00000335005 EVX2Q03828 476 aa26.88■■□□□ 1.89
ITM2C-203ENST00000335005 CNBD1Q8NA66 436 aa26.88■■□□□ 1.89
ITM2C-203ENST00000335005 CTCFLQ8NI51 663 aaPredicted RBP26.88■■□□□ 1.89
ITM2C-203ENST00000335005 GJD4Q96KN9 370 aaPredicted RBP26.88■■□□□ 1.89
ITM2C-203ENST00000335005 CYP2D6P10635 497 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms