RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ZNF579Q8NAF0 562 aaKnown RBP26.81■■□□□ 1.88
NDEL1-201ENST00000334527 SRPRBQ9Y5M8 271 aaKnown RBP26.81■■□□□ 1.88
NDEL1-201ENST00000334527 ERFEQ4G0M1 354 aa26.8■■□□□ 1.88
NDEL1-201ENST00000334527 C3orf67Q6ZVT6 689 aa26.8■■□□□ 1.88
NDEL1-201ENST00000334527 ENAHQ8N8S7 591 aaPredicted RBP26.8■■□□□ 1.88
NDEL1-201ENST00000334527 CGNQ9P2M7 1197 aaKnown RBP26.8■■□□□ 1.88
NDEL1-201ENST00000334527 SPDYE4A6NLX3 237 aa26.8■■□□□ 1.88
NDEL1-201ENST00000334527 VSTM4Q8IW00 320 aa26.8■■□□□ 1.88
NDEL1-201ENST00000334527 ZSCAN10Q96SZ4 725 aaPredicted RBP26.8■■□□□ 1.88
NDEL1-201ENST00000334527 TMEM232C9JQI7 657 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 DYNLL1P63167 89 aaKnown RBP26.79■■□□□ 1.88
NDEL1-201ENST00000334527 UBE4AQ14139 1066 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 CACNA1SQ13698 1873 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 CYP2D7A0A087X1C5 515 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 CAVIN4Q5BKX8 364 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 PDILTQ8N807 584 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 SMARCE1Q969G3 411 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 SHISA4Q96DD7 197 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 A0A1B0GUL6 1792 aa26.79■■□□□ 1.88
NDEL1-201ENST00000334527 TAF1P21675 1872 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 DUOX1Q9NRD9 1551 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 NT5DC1Q5TFE4 455 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 GRAMD1CQ8IYS0 662 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 CSRNP2Q9H175 543 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 VPS54Q9P1Q0 977 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 MYH2Q9UKX2 1941 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 TOP1P11387 765 aaKnown RBP26.78■■□□□ 1.88
NDEL1-201ENST00000334527 XBP1P17861 261 aa26.78■■□□□ 1.88
NDEL1-201ENST00000334527 BAZ2AQ9UIF9 1905 aaKnown RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 AHDC1Q5TGY3 1603 aaPredicted RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 PTPN21Q16825 1174 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 HSP90AA4PQ58FG1 418 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 IFIT1BQ5T764 474 aaKnown RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 SYT10Q6XYQ8 523 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 ERO1AQ96HE7 468 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 PRDM10Q9NQV6 1147 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 BSDC1Q9NW68 430 aaPredicted RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.77■■□□□ 1.888e-8■■□□□ 12.9
NDEL1-201ENST00000334527 V9GYY5 206 aaPredicted RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 SARSP49591 514 aaKnown RBP26.77■■□□□ 1.88
NDEL1-201ENST00000334527 PKN1Q16512 942 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 USP49Q70CQ1 688 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 CATIPQ7Z7H3 387 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 MLKLQ8NB16 471 aa26.77■■□□□ 1.88
NDEL1-201ENST00000334527 hCG_1642624A0A1W2PR95 340 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 FAM205CA6NFA0 338 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 ACTN4O43707 911 aaKnown RBP26.76■■□□□ 1.87
NDEL1-201ENST00000334527 PRDM1O75626 825 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 SLU7O95391 586 aaKnown RBP26.76■■□□□ 1.87
NDEL1-201ENST00000334527 ZNF827Q17R98 1081 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 CLEC4GQ6UXB4 293 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 BRIP1Q9BX63 1249 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 INTS13Q9NVM9 706 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 DACH1Q9UI36 760 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 FMR1Q06787 632 aaKnown RBP eCLIP26.76■■□□□ 1.87
NDEL1-201ENST00000334527 MORC3Q14149 939 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 SF3B3Q15393 1217 aaKnown RBP26.76■■□□□ 1.87
NDEL1-201ENST00000334527 TMX1Q9H3N1 280 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 MINPP1Q9UNW1 487 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 NRAPQ86VF7 1730 aa26.76■■□□□ 1.87
NDEL1-201ENST00000334527 TRIM75PA6NK02 468 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 KRT2P35908 639 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 GOLGA8FQ08AF8 430 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 GOLGA8DPQ0D2H9 430 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 KANK3Q6NY19 840 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 FEZ1Q99689 392 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 PHF20Q9BVI0 1012 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 NFE2L3Q9Y4A8 694 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 CCP110O43303 1012 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 PLEKHA8P1O95397 391 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 FUT2Q10981 343 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 IQCA1Q86XH1 822 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 ZNF384Q8TF68 577 aa26.75■■□□□ 1.87
NDEL1-201ENST00000334527 FAM84BQ96KN1 310 aaPredicted RBP26.75■■□□□ 1.87
NDEL1-201ENST00000334527 NOL10Q9BSC4 688 aaKnown RBP26.75■■□□□ 1.87
NDEL1-201ENST00000334527 KCNQ2O43526 872 aa26.74■■□□□ 1.87
NDEL1-201ENST00000334527 HOMER1Q86YM7 354 aa26.74■■□□□ 1.87
NDEL1-201ENST00000334527 TRIML1Q8N9V2 468 aa26.74■■□□□ 1.87
NDEL1-201ENST00000334527 V9GY48 417 aaPredicted RBP26.74■■□□□ 1.87
NDEL1-201ENST00000334527 PRPF3O43395 683 aaKnown RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 SMARCC1Q92922 1105 aaPredicted RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 SCN7AQ01118 1682 aa26.73■■□□□ 1.87
NDEL1-201ENST00000334527 TUBB4AP04350 444 aa26.73■■□□□ 1.87
NDEL1-201ENST00000334527 EARS2Q5JPH6 523 aaKnown RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 TRMT44Q8IYL2 757 aaKnown RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 ENOX1Q8TC92 643 aaKnown RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 RBM28Q9NW13 759 aaKnown RBP26.73■■□□□ 1.87
NDEL1-201ENST00000334527 CASZ1Q86V15 1759 aa26.73■■□□□ 1.87
NDEL1-201ENST00000334527 COL5A3P25940 1745 aaPredicted RBP26.72■■□□□ 1.87
NDEL1-201ENST00000334527 CDK11BP21127 795 aaKnown RBP26.72■■□□□ 1.87
NDEL1-201ENST00000334527 CTR9Q6PD62 1173 aa26.72■■□□□ 1.87
NDEL1-201ENST00000334527 L2HGDHQ9H9P8 463 aa26.72■■□□□ 1.87
NDEL1-201ENST00000334527 ZNF18P17022 549 aa26.72■■□□□ 1.87
NDEL1-201ENST00000334527 BICDL1Q6ZP65 573 aa26.72■■□□□ 1.87
NDEL1-201ENST00000334527 AATFQ9NY61 560 aaKnown RBP eCLIP26.72■■□□□ 1.87
NDEL1-201ENST00000334527 CELF1Q92879 486 aaKnown RBP26.71■■□□□ 1.87
NDEL1-201ENST00000334527 DHX58Q96C10 678 aa26.71■■□□□ 1.87
NDEL1-201ENST00000334527 CALM1P0DP23 149 aa26.71■■□□□ 1.87
NDEL1-201ENST00000334527 CALM2P0DP24 149 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms