RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 TEX35Q5T0J7 233 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
POLR1B-202ENST00000333990 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 MINPP1Q9UNW1 487 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 C21orf2O43822 256 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
POLR1B-202ENST00000333990 ITSN1Q15811 1721 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 ISM2Q6H9L7 571 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
POLR1B-202ENST00000333990 CUTAO60888 179 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 PHACTR2O75167 634 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 NEBLO76041 1014 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
POLR1B-202ENST00000333990 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 PI4KBQ9UBF8 816 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 KLRF2D3W0D1 207 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 USP8P40818 1118 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
POLR1B-202ENST00000333990 PHKBQ93100 1093 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
POLR1B-202ENST00000333990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.68□□□□□ -0.38
POLR1B-202ENST00000333990 KIF5CO60282 957 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 USP14P54578 494 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 FAM160A1Q05DH4 1040 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 ZBTB7AO95365 584 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 SP4Q02446 784 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 CLRN2A0PK11 232 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
POLR1B-202ENST00000333990 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
POLR1B-202ENST00000333990 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 PFKFB2O60825 505 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 ZSCAN23Q3MJ62 389 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 USH1GQ495M9 461 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 TBC1D5Q92609 795 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
POLR1B-202ENST00000333990 ZMYM6O95789 1325 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 SMTNP53814 917 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ERLIN1O75477 346 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 UBASH3AP57075 661 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ARMC9Q7Z3E5 817 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 TMC6Q7Z403 805 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 CELF1Q92879 486 aaKnown RBP12.66□□□□□ -0.38
POLR1B-202ENST00000333990 DRC1Q96MC2 740 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 KIF4AO95239 1232 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
POLR1B-202ENST00000333990 TXKP42681 527 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
POLR1B-202ENST00000333990 AZI2Q9H6S1 392 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ADCY9O60503 1353 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
POLR1B-202ENST00000333990 TTLL1O95922 423 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 NOD1Q9Y239 953 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 ARHGEF35A5YM69 484 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 KIF22Q14807 665 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 ENOX2Q16206 610 aaKnown RBP12.65□□□□□ -0.38
POLR1B-202ENST00000333990 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 CCNA1P78396 465 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
POLR1B-202ENST00000333990 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
POLR1B-202ENST00000333990 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
POLR1B-202ENST00000333990 ESPNB1AK53 854 aa12.65□□□□□ -0.39
POLR1B-202ENST00000333990 AKR1B10O60218 316 aa12.65□□□□□ -0.39
POLR1B-202ENST00000333990 SCG2P13521 617 aa12.65□□□□□ -0.39
POLR1B-202ENST00000333990 MECOMQ03112 1051 aa12.65□□□□□ -0.39
POLR1B-202ENST00000333990 ANO6Q4KMQ2 910 aa12.65□□□□□ -0.39
POLR1B-202ENST00000333990 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.39
POLR1B-202ENST00000333990 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms