RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 A0A1W2PQD8 194 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 USP17L3A6NCW0 530 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 USP17L4A6NCW7 530 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 CMA1P23946 247 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 ZNF174Q15697 407 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 ATL3Q6DD88 541 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 USP17L1Q7RTZ2 530 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 CNNM3Q8NE01 707 aa20.94■□□□□ 0.94
LYSMD4-201ENST00000332728 PRR29P0C7W0 189 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 FOXP4Q8IVH2 680 aaPredicted RBP20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 TGFBRAP1Q8WUH2 860 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 RTL9Q8NET4 1388 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 USP27XA6NNY8 438 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 RIMBP2O15034 1052 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 TRIM37O94972 964 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 CATIPQ7Z7H3 387 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 KCNH3Q9ULD8 1083 aa20.93■□□□□ 0.94
LYSMD4-201ENST00000332728 U2AF2P26368 475 aaKnown RBP eCLIP20.92■□□□□ 0.94
LYSMD4-201ENST00000332728 IQCA1Q86XH1 822 aa20.92■□□□□ 0.94
LYSMD4-201ENST00000332728 RASGRP4Q8TDF6 673 aa20.92■□□□□ 0.94
LYSMD4-201ENST00000332728 GPKOWQ92917 476 aaPredicted RBP eCLIP20.92■□□□□ 0.94
LYSMD4-201ENST00000332728 AFF2P51816 1311 aa20.92■□□□□ 0.94
LYSMD4-201ENST00000332728 GOLGA8HP0CJ92 632 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 AFMP43652 599 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 METTL16Q86W50 562 aaKnown RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 TRMT44Q8IYL2 757 aaKnown RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 GJD4Q96KN9 370 aaPredicted RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 CRNKL1Q9BZJ0 848 aaKnown RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 XPO4Q9C0E2 1151 aaKnown RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 DEXIO95424 95 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 SLC10A5Q5PT55 438 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 EPSTI1Q96J88 318 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 UFL1O94874 794 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 SLURP2P0DP57 97 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 CDC25AP30304 524 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 PKN1Q16512 942 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 TMC6Q7Z403 805 aa20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 SRBD1Q8N5C6 995 aaKnown RBP20.91■□□□□ 0.94
LYSMD4-201ENST00000332728 CHD4Q14839 1912 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 GPSM2P81274 684 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 RPGRQ92834 1020 aaKnown RBP20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 PCDHA5Q9Y5H7 936 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 TFAP4Q01664 338 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 PDE4BQ07343 736 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 FNBP4Q8N3X1 1017 aaPredicted RBP20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 CSRNP2Q9H175 543 aa20.9■□□□□ 0.94
LYSMD4-201ENST00000332728 LDHBP07195 334 aaKnown RBP20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 HSPA1LP34931 641 aa20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 PRR5LQ6MZQ0 368 aa20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 KRI1Q8N9T8 703 aaKnown RBP20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 DPF2Q92785 391 aa20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 STX8Q9UNK0 236 aa20.89■□□□□ 0.94
LYSMD4-201ENST00000332728 PLCD1P51178 756 aa20.89■□□□□ 0.93
LYSMD4-201ENST00000332728 DHX58Q96C10 678 aa20.89■□□□□ 0.93
LYSMD4-201ENST00000332728 MXD3Q9BW11 206 aa20.89■□□□□ 0.93
LYSMD4-201ENST00000332728 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
LYSMD4-201ENST00000332728 C6orf229H3BNL8 230 aa20.88■□□□□ 0.93
LYSMD4-201ENST00000332728 TROAPQ12815 778 aa20.88■□□□□ 0.93
LYSMD4-201ENST00000332728 ANKRD2Q9GZV1 360 aa20.88■□□□□ 0.93
LYSMD4-201ENST00000332728 MKNK2Q9HBH9 465 aa20.88■□□□□ 0.93
LYSMD4-201ENST00000332728 HSP90AA2PQ14568 343 aaPredicted RBP20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 RESP18Q5W5W9 173 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 KLHL10Q6JEL2 608 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 JMYQ8N9B5 988 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 NAT10Q9H0A0 1025 aaKnown RBP20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 CACNA1SQ13698 1873 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 NLRP12P59046 1061 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 TPD52L1Q16890 204 aaPredicted RBP20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 PIK3AP1Q6ZUJ8 805 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 SMYD4Q8IYR2 804 aaPredicted RBP20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 WASF1Q92558 559 aa20.87■□□□□ 0.93
LYSMD4-201ENST00000332728 TPM2P07951 284 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 BMP6P22004 513 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 DOCK2Q92608 1830 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 SKILP12757 684 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 VAT1LQ9HCJ6 419 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 ARAP2Q8WZ64 1704 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 A0A087X0B3 334 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 RC3H1Q5TC82 1133 aaKnown RBP20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 KRBA2Q6ZNG9 492 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 CREBRFQ8IUR6 639 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 TMTC2Q8N394 836 aa20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 CTCFLQ8NI51 663 aaPredicted RBP20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 FBXO2Q9UK22 296 aaPredicted RBP20.86■□□□□ 0.93
LYSMD4-201ENST00000332728 BTAF1O14981 1849 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 VWA3AA6NCI4 1184 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 SERPINB2P05120 415 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 MCM7P33993 719 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 EIF6P56537 245 aaKnown RBP20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 STX17P56962 302 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 PICALMQ13492 652 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 GRAPQ13588 217 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 CLEC10AQ8IUN9 316 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 LRRC8AQ8IWT6 810 aa20.85■□□□□ 0.93
LYSMD4-201ENST00000332728 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms