RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CASP8Q14790 479 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 TAF7LQ5H9L4 462 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 APTXQ7Z2E3 356 aaKnown RBP16.42■□□□□ 0.22
SNX20-202ENST00000330943 ACRBPQ8NEB7 543 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 PCDHB6Q9Y5E3 794 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
SNX20-202ENST00000330943 MFAP3LO75121 409 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 MMP1P03956 469 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 ERCC5P28715 1186 aaPredicted RBP16.42■□□□□ 0.22
SNX20-202ENST00000330943 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
SNX20-202ENST00000330943 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 ABL1P00519 1130 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 A1BGP04217 495 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 MYH7P12883 1935 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 CTAGE15A4D2H0 777 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 CTAGE8P0CG41 777 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 MCAMP43121 646 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 CTAGE6Q86UF2 777 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 CTAGE4Q8IX94 777 aa16.41■□□□□ 0.22
SNX20-202ENST00000330943 IDH1O75874 414 aaKnown RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 ADD2P35612 726 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 AFMP43652 599 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 NR5A1Q13285 461 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 SPATA1Q5VX52 437 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 KANK3Q6NY19 840 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 NAPGQ99747 312 aaPredicted RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 IFIT3O14879 490 aaKnown RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
SNX20-202ENST00000330943 CASP1P29466 404 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX20-202ENST00000330943 TUBB2AQ13885 445 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 TUBB2BQ9BVA1 445 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
SNX20-202ENST00000330943 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 SMYD4Q8IYR2 804 aaPredicted RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 GBP3Q9H0R5 595 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 GYPCP04921 128 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 PBX1P40424 430 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 FILIP1LQ4L180 1135 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 NOA1Q8NC60 698 aaKnown RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 WASF1Q92558 559 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNX20-202ENST00000330943 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 ZNF335Q9H4Z2 1342 aaPredicted RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 SPATA20Q8TB22 786 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
SNX20-202ENST00000330943 SRPRBQ9Y5M8 271 aaKnown RBP16.39■□□□□ 0.21
SNX20-202ENST00000330943 CCT6AP40227 531 aaKnown RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 TUBB4BP68371 445 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 WHAMMP3Q1A5X7 153 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 GOLGA6L1Q8N7Z2 621 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 LRRIQ3A6PVS8 624 aaPredicted RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 GLI3P10071 1580 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 IFNAR1P17181 557 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 NUP188Q5SRE5 1749 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 NCAPH2Q6IBW4 605 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 ZNF579Q8NAF0 562 aaKnown RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
SNX20-202ENST00000330943 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
SNX20-202ENST00000330943 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 COBLO75128 1261 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 NOP2P46087 812 aaKnown RBP16.37■□□□□ 0.21
SNX20-202ENST00000330943 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 CUL4BQ13620 913 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 CTAGE1Q96RT6 745 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
SNX20-202ENST00000330943 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
SNX20-202ENST00000330943 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 RPS6KA5O75582 802 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 ERVK-24P63145 666 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 CDKAL1Q5VV42 579 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 OXER1Q8TDS5 423 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 CABP5Q9NP86 173 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 MYH8P13535 1937 aa16.37■□□□□ 0.21
SNX20-202ENST00000330943 A0A087X0B3 334 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 EPSTI1Q96J88 318 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms