RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NDUFB9Q9Y6M9 179 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 SLC34A2O95436 690 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 IFIT2P09913 472 aaKnown RBP16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 HOXA7P31268 230 aaPredicted RBP16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 USP5P45974 858 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 PRKCZQ05513 592 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 SERPINB13Q9UIV8 391 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
GTF3C6-201ENST00000329970 PDE6AP16499 860 aa16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 CAPN2P17655 700 aa16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 JAG1P78504 1218 aa16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 SAP30BPQ9UHR5 308 aaKnown RBP16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 BAZ2AQ9UIF9 1905 aaKnown RBP16.48■□□□□ 0.23
GTF3C6-201ENST00000329970 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 TCRBV5S4A2TA0A5A2 114 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 ATP5JP18859 108 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 UBXN2AP68543 259 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 MTMR2Q13614 643 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 ASCC2Q9H1I8 757 aaPredicted RBP16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 MORF4L1Q9UBU8 362 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
GTF3C6-201ENST00000329970 TNPO2O14787 897 aaKnown RBP16.46■□□□□ 0.23
GTF3C6-201ENST00000329970 GDF11O95390 407 aa16.46■□□□□ 0.23
GTF3C6-201ENST00000329970 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
GTF3C6-201ENST00000329970 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 APBB1O00213 710 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 GOLIM4O00461 696 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 GJB1P08034 283 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 GJA8P48165 433 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 FLT3LGP49771 235 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 GABPAQ06546 454 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 MTFR1Q15390 333 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 C20orf194Q5TEA3 1177 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 GTF3C2Q8WUA4 911 aaPredicted RBP16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 COA7Q96BR5 231 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 HAUS7Q99871 368 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 PAG1Q9NWQ8 432 aa16.45■□□□□ 0.22
GTF3C6-201ENST00000329970 ADCY3O60266 1144 aa16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 CEP290O15078 2479 aa16.44■□□□□ 0.22
GTF3C6-201ENST00000329970 GH2P01242 217 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 CCL5P13501 91 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 SHMT1P34896 483 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 ADD2P35612 726 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 PLCD1P51178 756 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 USP14P54578 494 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.43■□□□□ 0.22
GTF3C6-201ENST00000329970 HERVK_113P62684 666 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 UBE3CQ15386 1083 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 UBE2Q1Q7Z7E8 422 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
GTF3C6-201ENST00000329970 RLFQ13129 1914 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 PARP14Q460N5 1801 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 POLR3DP05423 398 aaPredicted RBP16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 EDC3Q96F86 508 aaKnown RBP16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 MCM9Q9NXL9 1143 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
GTF3C6-201ENST00000329970 MYCP01106 439 aaPredicted RBP16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 INHAP05111 366 aa16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
GTF3C6-201ENST00000329970 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L15C9J2P7 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L13C9JLJ4 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L11C9JVI0 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L18D6R9N7 530 aa16.39■□□□□ 0.21
GTF3C6-201ENST00000329970 USP17L22D6RA61 530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms