RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 AK7Q96M32 723 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 FEZ1Q99689 392 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 OGFRQ9NZT2 677 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 ZNF397Q8NF99 534 aaPredicted RBP16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 SAMSN1Q9NSI8 373 aaKnown RBP16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 CPLX3Q8WVH0 158 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 EPSTI1Q96J88 318 aa16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
ATP2C1-201ENST00000328560 COBLO75128 1261 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 ZNF174Q15697 407 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 XBP1P17861 261 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 ETF1P62495 437 aaKnown RBP16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 ITPK1Q13572 414 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 MNS1Q8NEH6 495 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 INTS13Q9NVM9 706 aa16.06■□□□□ 0.16
ATP2C1-201ENST00000328560 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 EARS2Q5JPH6 523 aaKnown RBP16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 EVX2Q03828 476 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 PNPLA7Q6ZV29 1317 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 MYH7P12883 1935 aa16.05■□□□□ 0.16
ATP2C1-201ENST00000328560 FAM237AA0A1B0GTK4 181 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 DMTNQ08495 405 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 CAVIN4Q5BKX8 364 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 BAG1Q99933 345 aaPredicted RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 C3orf67Q6ZVT6 689 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 DESI2Q9BSY9 194 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.161e-6■□□□□ 10.5
ATP2C1-201ENST00000328560 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 USP17L12C9JPN9 530 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 USP17L21D6R901 530 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 NTSR2O95665 410 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 DACH1Q9UI36 760 aa16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 SRPRBQ9Y5M8 271 aaKnown RBP16.04■□□□□ 0.16
ATP2C1-201ENST00000328560 NMT2O60551 498 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 GNG11P61952 73 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 KRT2P35908 639 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 ZNF771Q7L3S4 317 aaPredicted RBP16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 CCP110O43303 1012 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 UBXN4Q92575 508 aa16.03■□□□□ 0.16
ATP2C1-201ENST00000328560 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 WNT7AO00755 349 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 CARD6Q9BX69 1037 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 PPP2R2CQ9Y2T4 447 aa16.02■□□□□ 0.16
ATP2C1-201ENST00000328560 ZSCAN12O43309 604 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 KCNQ2O43526 872 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 A0A087X0B3 334 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 SEC23AQ15436 765 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 MARCH10Q8NA82 808 aaPredicted RBP16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 RNF26Q9BY78 433 aaPredicted RBP16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 KCND1Q9NSA2 647 aa16.02■□□□□ 0.15
ATP2C1-201ENST00000328560 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 MORC3Q14149 939 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 REXO1L1PQ8IX06 675 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 EPC1Q9H2F5 836 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 L2HGDHQ9H9P8 463 aa16.01■□□□□ 0.15
ATP2C1-201ENST00000328560 TEX33O43247 280 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 KLRK1P26718 216 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 PKN1Q16512 942 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 KANK3Q6NY19 840 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 RGS22Q8NE09 1264 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms