RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TCHPQ9BT92 498 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
COL4A5-201ENST00000328300 LAD1O00515 517 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 GSPT1P15170 499 aaKnown RBP12.82□□□□□ -0.36
COL4A5-201ENST00000328300 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
COL4A5-201ENST00000328300 CSADQ9Y600 493 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 CBX1P83916 185 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 GRAPQ13588 217 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
COL4A5-201ENST00000328300 SYNCQ9H7C4 482 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
COL4A5-201ENST00000328300 BTDP43251 543 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 GNG11P61952 73 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
COL4A5-201ENST00000328300 SLFN12Q8IYM2 578 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 PTPRMP28827 1452 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 CCNT1O60563 726 aaKnown RBP12.81□□□□□ -0.36
COL4A5-201ENST00000328300 GNA14O95837 355 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 NUCKS1Q9H1E3 243 aaKnown RBP12.81□□□□□ -0.36
COL4A5-201ENST00000328300 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 JAG2Q9Y219 1238 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 BRD1O95696 1058 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 KRT26Q7Z3Y9 468 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 USP17L21D6R901 530 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 UBXN1Q04323 297 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 CLUL1Q15846 466 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 ASPRV1Q53RT3 343 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 LEO1Q8WVC0 666 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-201ENST00000328300 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
COL4A5-201ENST00000328300 RXRAP19793 462 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
COL4A5-201ENST00000328300 USP14P54578 494 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CALCRLQ16602 461 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 IMPACTQ9P2X3 320 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CTAGE15A4D2H0 777 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CETN3O15182 167 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CTAGE8P0CG41 777 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CTAGE6Q86UF2 777 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CTAGE4Q8IX94 777 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 SEC24BO95487 1268 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 NLRP12P59046 1061 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CTNNBL1Q8WYA6 563 aaPredicted RBP12.8□□□□□ -0.36
COL4A5-201ENST00000328300 MMRN2Q9H8L6 949 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 DCCP43146 1447 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 GYG1P46976 350 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 BCAMP50895 628 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 FAM193AP78312 1265 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 PDE4DQ08499 809 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 STRN3Q13033 797 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
COL4A5-201ENST00000328300 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 CEP128Q6ZU80 1094 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
COL4A5-201ENST00000328300 AZI2Q9H6S1 392 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
COL4A5-201ENST00000328300 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
COL4A5-201ENST00000328300 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
COL4A5-201ENST00000328300 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 PRDM1O75626 825 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 COA1Q9GZY4 146 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 ADALQ6DHV7 355 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 GOLGA5Q8TBA6 731 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 ZKSCAN5Q9Y2L8 839 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 TNKSO95271 1327 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 OTUD6AQ7L8S5 288 aa12.79□□□□□ -0.36
COL4A5-201ENST00000328300 ADD2P35612 726 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 DNM2P50570 870 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 ZNF445P59923 1031 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 PAK1Q13153 545 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms