RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 EVCP57679 992 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 USP50Q70EL3 339 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 IQCA1Q86XH1 822 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 ZNF444Q8N0Y2 327 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 SH2B1Q9NRF2 756 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 ERICH2A1L162 156 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 EPHX2P34913 555 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 LIFRP42702 1097 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 TFAP4Q01664 338 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 PPP2R3BQ9Y5P8 575 aa12.05□□□□□ -0.48
VIPAS39-201ENST00000327028 TNKSO95271 1327 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 LARGE1O95461 756 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 SEC23AQ15436 765 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 CCDC178Q5BJE1 867 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 SGMS1Q86VZ5 419 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TEPSINQ96N21 525 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 LARP6Q9BRS8 491 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TBC1D12O60347 775 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 CUL4AQ13619 759 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 WTAPQ15007 396 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 DEFB129Q9H1M3 183 aa12.04□□□□□ -0.48
VIPAS39-201ENST00000327028 FAM196BA6NMK8 535 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 ME3Q16798 604 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 ENAHQ8N8S7 591 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 TAF1DQ9H5J8 278 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 KLF18A0A0U1RQI7 1052 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 AKR1B1P15121 316 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 ZC3H15Q8WU90 426 aaKnown RBP12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
VIPAS39-201ENST00000327028 POTECB2RU33 542 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 NMT2O60551 498 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 SLURP2P0DP57 97 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 MAP3K10Q02779 954 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 CCDC69A6NI79 296 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 PFKFB2O60825 505 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 NFXL1Q6ZNB6 911 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 ANKS1AQ92625 1134 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
VIPAS39-201ENST00000327028 NID2Q14112 1375 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 RCAN1P53805 252 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 RCSD1Q6JBY9 416 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 APOA5Q6Q788 366 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 PNMA8AQ86V59 439 aaPredicted RBP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 NOVP48745 357 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 SLKQ9H2G2 1235 aaPredicted RBP12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 HPS5Q9UPZ3 1129 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 SLC12A7Q9Y666 1083 aa12.01□□□□□ -0.49
VIPAS39-201ENST00000327028 SSC5DA1L4H1 1573 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 NECAB1Q8N987 351 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
VIPAS39-201ENST00000327028 MPHOSPH10O00566 681 aaKnown RBP12□□□□□ -0.49
VIPAS39-201ENST00000327028 ZBTB43O43298 467 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 STK3Q13188 491 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
VIPAS39-201ENST00000327028 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 SULF1Q8IWU6 871 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
VIPAS39-201ENST00000327028 CEP95Q96GE4 821 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms