RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
TUBA3D-201ENST00000321253 EVI5LQ96CN4 794 aa17.61■□□□□ 0.41
TUBA3D-201ENST00000321253 STRBPQ96SI9 672 aaKnown RBP17.61■□□□□ 0.41
TUBA3D-201ENST00000321253 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
TUBA3D-201ENST00000321253 MOGSQ13724 837 aa17.6■□□□□ 0.41
TUBA3D-201ENST00000321253 CERKLQ49MI3 558 aaPredicted RBP17.6■□□□□ 0.41
TUBA3D-201ENST00000321253 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
TUBA3D-201ENST00000321253 GPAA1O43292 621 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 GH2P01242 217 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 CYP2D6P10635 497 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 GNAT2P19087 354 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 ERO1AQ96HE7 468 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 PARK7Q99497 189 aaKnown RBP17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 BAZ2AQ9UIF9 1905 aaKnown RBP17.59■□□□□ 0.41
TUBA3D-201ENST00000321253 USP17L12C9JPN9 530 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 USP17L21D6R901 530 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 TLR2O60603 784 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 SHMT1P34896 483 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 JAG1P78504 1218 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 SP3Q02447 781 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 GABPAQ06546 454 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 WDR18Q9BV38 432 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 CABP5Q9NP86 173 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 SWAP70Q9UH65 585 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 PTPRFP10586 1907 aa17.58■□□□□ 0.41
TUBA3D-201ENST00000321253 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 M0R2C6 588 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 APPP05067 770 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 HMGCS2P54868 508 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 ABHD8Q96I13 439 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 AGTPBP1Q9UPW5 1226 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 SLC45A1Q9Y2W3 748 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 EVX2Q03828 476 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 MTMR2Q13614 643 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 RAB3GAP1Q15042 981 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 PKN2Q16513 984 aaKnown RBP17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 TMOD4Q9NZQ9 345 aa17.57■□□□□ 0.4
TUBA3D-201ENST00000321253 CYP2D7A0A087X1C5 515 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 GSG1L2A8MUP6 293 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 CAPN15O75808 1086 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 TDO2P48775 406 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 BACE1P56817 501 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 CD99L2Q8TCZ2 262 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 DYNLL2Q96FJ2 89 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
TUBA3D-201ENST00000321253 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 USP17L10C9JJH3 530 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 CYP2C8P10632 490 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 PABPC4Q13310 644 aaKnown RBP eCLIP17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 ARHGEF6Q15052 776 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 SH3D19Q5HYK7 790 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 FEZ1Q99689 392 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 CPA4Q9UI42 421 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
TUBA3D-201ENST00000321253 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
TUBA3D-201ENST00000321253 KIF22Q14807 665 aa17.54■□□□□ 0.4
TUBA3D-201ENST00000321253 TREML2Q5T2D2 321 aa17.54■□□□□ 0.4
TUBA3D-201ENST00000321253 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
TUBA3D-201ENST00000321253 MINDY4BA8MYZ0 360 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 PATL2C9JE40 543 aaKnown RBP17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 C17orf99Q6UX52 265 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 C16orf86Q6ZW13 317 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 MYH8P13535 1937 aa17.53■□□□□ 0.4
TUBA3D-201ENST00000321253 OSBPP22059 807 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 CDK8P49336 464 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 USP17L2Q6R6M4 530 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 TMEM179Q6ZVK1 233 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 OTOP1Q7RTM1 612 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 CCDC17Q96LX7 622 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 EPB41L4AQ9HCS5 686 aaPredicted RBP17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 ADGRA2Q96PE1 1338 aa17.52■□□□□ 0.4
TUBA3D-201ENST00000321253 LACTBP83111 547 aaPredicted RBP17.52■□□□□ 0.39
TUBA3D-201ENST00000321253 SEPT2Q15019 361 aa17.52■□□□□ 0.39
TUBA3D-201ENST00000321253 FBXO46Q6PJ61 603 aaPredicted RBP17.52■□□□□ 0.39
TUBA3D-201ENST00000321253 IFNL3Q8IZI9 196 aa17.52■□□□□ 0.39
TUBA3D-201ENST00000321253 NAPBQ9H115 298 aa17.52■□□□□ 0.39
TUBA3D-201ENST00000321253 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
TUBA3D-201ENST00000321253 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
TUBA3D-201ENST00000321253 AKR1B1P15121 316 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms