RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PAF1Q8N7H5 531 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ATP7BP35670 1465 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
CLIP4-201ENST00000320081 SCNN1DP51172 638 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 TNIP1Q15025 636 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 PIGBQ92521 554 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 CARMIL3Q8ND23 1372 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
CLIP4-201ENST00000320081 TACC1O75410 805 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 GTF2IP78347 998 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 LCORLQ8N3X6 602 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 ATRIPQ8WXE1 791 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 PTGDRQ13258 359 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.54■□□□□ 0.56
CLIP4-201ENST00000320081 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 PGBD1Q96JS3 809 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 PAK1Q13153 545 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 SCARF1Q14162 830 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
CLIP4-201ENST00000320081 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 CALCOCO1Q9P1Z2 691 aa18.54■□□□□ 0.56
CLIP4-201ENST00000320081 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
CLIP4-201ENST00000320081 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 DDX39AO00148 427 aaKnown RBP18.53■□□□□ 0.56
CLIP4-201ENST00000320081 KIF20AO95235 890 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 SIK1P57059 783 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 TTLL12Q14166 644 aaPredicted RBP18.53■□□□□ 0.56
CLIP4-201ENST00000320081 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 IPO4Q8TEX9 1081 aaKnown RBP18.53■□□□□ 0.56
CLIP4-201ENST00000320081 NYXQ9GZU5 481 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 PIH1D3Q9NQM4 214 aaKnown RBP18.53■□□□□ 0.56
CLIP4-201ENST00000320081 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 MLKLQ8NB16 471 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 TRIM31Q9BZY9 425 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 ABCC3O15438 1527 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
CLIP4-201ENST00000320081 BICD1Q96G01 975 aa18.53■□□□□ 0.56
CLIP4-201ENST00000320081 RDH13Q8NBN7 331 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 SNX29Q8TEQ0 813 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 NELFBQ8WX92 580 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 TOM1O60784 492 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 UBE4AQ14139 1066 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 HERC4Q5GLZ8 1057 aaPredicted RBP18.52■□□□□ 0.56
CLIP4-201ENST00000320081 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 PYM1Q9BRP8 204 aaKnown RBP18.52■□□□□ 0.56
CLIP4-201ENST00000320081 KIF1BO60333 1816 aa18.52■□□□□ 0.56
CLIP4-201ENST00000320081 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.55
CLIP4-201ENST00000320081 MFSD14BQ5SR56 506 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 CPXCR1Q8N123 301 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 TECP42680 631 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 MCAMP43121 646 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 LRWD1Q9UFC0 647 aa18.52■□□□□ 0.55
CLIP4-201ENST00000320081 CDK12Q9NYV4 1490 aaPredicted RBP18.51■□□□□ 0.55
CLIP4-201ENST00000320081 SV2BQ7L1I2 683 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 C10orf67Q8IYJ2 551 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 OGFOD1Q8N543 542 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 LINC00301Q8NCQ3 95 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 LRRC7Q96NW7 1537 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 HGSO14964 777 aaPredicted RBP18.51■□□□□ 0.55
CLIP4-201ENST00000320081 KRT13P13646 458 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 CMA1P23946 247 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 DIXDC1Q155Q3 683 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 KRBA2Q6ZNG9 492 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 ARHGAP6O43182 974 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 RASGRF1Q13972 1273 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 KIAA1524Q8TCG1 905 aa18.51■□□□□ 0.55
CLIP4-201ENST00000320081 RESTQ13127 1097 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 DOK7Q18PE1 504 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 FAM212AQ96EL1 285 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 MROH5Q6ZUA9 1318 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
CLIP4-201ENST00000320081 RBM28Q9NW13 759 aaKnown RBP18.5■□□□□ 0.55
CLIP4-201ENST00000320081 LMTK3Q96Q04 1460 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 UTP14CQ5TAP6 766 aaKnown RBP18.5■□□□□ 0.55
CLIP4-201ENST00000320081 TCHPQ9BT92 498 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 ADCY10Q96PN6 1610 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
CLIP4-201ENST00000320081 HARSP12081 509 aaKnown RBP18.49■□□□□ 0.55
CLIP4-201ENST00000320081 KRT83P78385 493 aa18.49■□□□□ 0.55
CLIP4-201ENST00000320081 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
CLIP4-201ENST00000320081 CETN1Q12798 172 aa18.49■□□□□ 0.55
CLIP4-201ENST00000320081 CCDC25Q86WR0 208 aa18.49■□□□□ 0.55
CLIP4-201ENST00000320081 EPSTI1Q96J88 318 aa18.49■□□□□ 0.55
CLIP4-201ENST00000320081 ZSCAN10Q96SZ4 725 aaPredicted RBP18.49■□□□□ 0.55
CLIP4-201ENST00000320081 SAMSN1Q9NSI8 373 aaKnown RBP18.49■□□□□ 0.55
CLIP4-201ENST00000320081 NLRP1Q9C000 1473 aa18.49■□□□□ 0.55
CLIP4-201ENST00000320081 TYW1BQ6NUM6 668 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms