RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
RPGR-201ENST00000318842 BPIFA3Q9BQP9 254 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 UBXN6Q9BZV1 441 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 EPB41L4AQ9HCS5 686 aaPredicted RBP10.96□□□□□ -0.65
RPGR-201ENST00000318842 JAG2Q9Y219 1238 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 H7C1W4 665 aa10.96□□□□□ -0.66
RPGR-201ENST00000318842 SH2B2O14492 632 aaPredicted RBP10.96□□□□□ -0.66
RPGR-201ENST00000318842 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.66
RPGR-201ENST00000318842 TRIM29Q14134 588 aa10.96□□□□□ -0.66
RPGR-201ENST00000318842 EZH2Q15910 746 aaKnown RBP10.96□□□□□ -0.66
RPGR-201ENST00000318842 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.66
RPGR-201ENST00000318842 PLBD2Q8NHP8 589 aa10.96□□□□□ -0.66
RPGR-201ENST00000318842 SDR42E1Q8WUS8 393 aa10.96□□□□□ -0.66
RPGR-201ENST00000318842 RASSF4Q9H2L5 321 aa10.96□□□□□ -0.66
RPGR-201ENST00000318842 MINDY4BA8MYZ0 360 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 MBD4O95243 580 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 GYPCP04921 128 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
RPGR-201ENST00000318842 DHX8Q14562 1220 aaKnown RBP10.95□□□□□ -0.66
RPGR-201ENST00000318842 HLFQ16534 295 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 FAM204AQ9H8W3 233 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
RPGR-201ENST00000318842 HDAC5Q9UQL6 1122 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 AKR1B15C9JRZ8 316 aaPredicted RBP10.95□□□□□ -0.66
RPGR-201ENST00000318842 LDHAL6AQ6ZMR3 332 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 KCND1Q9NSA2 647 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 NFAT5O94916 1531 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 CCDC175P0C221 793 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 ZNF18P17022 549 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 CASP8Q14790 479 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 PTPROQ16827 1216 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 SRLQ86TD4 932 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 NOSTRINQ8IVI9 506 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 TXLNBQ8N3L3 684 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 GDAQ9Y2T3 454 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
RPGR-201ENST00000318842 PP2D1A8MPX8 630 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 NMT2O60551 498 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 CYP27A1Q02318 531 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 TCIRG1Q13488 830 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 KCNH5Q8NCM2 988 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 IGDCC4Q8TDY8 1250 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 APPBP2Q92624 585 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 MPHOSPH8Q99549 860 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
RPGR-201ENST00000318842 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
RPGR-201ENST00000318842 CXCR5P32302 372 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 APTXQ7Z2E3 356 aaKnown RBP10.94□□□□□ -0.66
RPGR-201ENST00000318842 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 PPFIBP1Q86W92 1011 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
RPGR-201ENST00000318842 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
RPGR-201ENST00000318842 CNNM1Q9NRU3 951 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 RGPD5Q99666 1765 aa10.94□□□□□ -0.66
RPGR-201ENST00000318842 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 NR1I3Q14994 352 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 RASGRP4Q8TDF6 673 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 HDAC7Q8WUI4 952 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 MMS19Q96T76 1030 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 MYO5AQ9Y4I1 1855 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 STX10O60499 249 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 PLEKHA8P1O95397 391 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 ATP1A1P05023 1023 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 LRRC31Q6UY01 552 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 RCCD1A6NED2 376 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 KIF5CO60282 957 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 PDE6AP16499 860 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 ACTN2P35609 894 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 HPS3Q969F9 1004 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SAMM50Q9Y512 469 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 SYNRGQ9UMZ2 1314 aa10.93□□□□□ -0.66
RPGR-201ENST00000318842 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
RPGR-201ENST00000318842 N4BP3O15049 544 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 ITGA6P23229 1130 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 PMS1P54277 932 aaKnown RBP10.92□□□□□ -0.66
RPGR-201ENST00000318842 C2orf54Q08AI8 447 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 CUL4BQ13620 913 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 MORC3Q14149 939 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
RPGR-201ENST00000318842 GPATCH11Q8N954 259 aa10.92□□□□□ -0.66
RPGR-201ENST00000318842 LIG3P49916 1009 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms