RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 MAPKAPK5Q8IW41 473 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 ZNF512BQ96KM6 892 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 MAP3K14Q99558 947 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 BLZF1Q9H2G9 400 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 IGSF3O75054 1194 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 TPM3P06753 285 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 GNAT2P19087 354 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 NLRP12P59046 1061 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 ATL3Q6DD88 541 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 RIOK1Q9BRS2 568 aaKnown RBP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 SPTLC3Q9NUV7 552 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 PES1O00541 588 aaKnown RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 DEXIO95424 95 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 NLRP5P59047 1200 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 PTPN14Q15678 1187 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 CEP135Q66GS9 1140 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 FAM196AQ6ZSG2 479 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 SHISA4Q96DD7 197 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 BSDC1Q9NW68 430 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 LRP6O75581 1613 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 COL1A1P02452 1464 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 KRBA2Q6ZNG9 492 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 TGFBRAP1Q8WUH2 860 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 USP21Q9UK80 565 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 ABCC6O95255 1503 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 ZNF804BA4D1E1 1349 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 CCDC196A0A1B0GTZ2 297 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
SEC16A-204ENST00000313084 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
SEC16A-204ENST00000313084 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 RIMBP2O15034 1052 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 ARMCX5Q6P1M9 558 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 WASF1Q92558 559 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
SEC16A-204ENST00000313084 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.58
SEC16A-204ENST00000313084 ABCA3Q99758 1704 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 BMP6P22004 513 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■■□□□ 13.4
SEC16A-204ENST00000313084 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
SEC16A-204ENST00000313084 TFAP4Q01664 338 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 MRFAP1L1Q96HT8 127 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 PRIMPOLQ96LW4 560 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 AK7Q96M32 723 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
SEC16A-204ENST00000313084 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 DCP1AQ9NPI6 582 aaPredicted RBP11.4□□□□□ -0.58
SEC16A-204ENST00000313084 NFE2L3Q9Y4A8 694 aa11.4□□□□□ -0.58
SEC16A-204ENST00000313084 TRIM75PA6NK02 468 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 FMR1Q06787 632 aaKnown RBP eCLIP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 PICALMQ13492 652 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 POSTNQ15063 836 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 ALX1Q15699 326 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SYT10Q6XYQ8 523 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 STAG2Q8N3U4 1231 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 FBXL16Q8N461 479 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SAMSN1Q9NSI8 373 aaKnown RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SLURP2P0DP57 97 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 XBP1P17861 261 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 CCZ1BP86790 482 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 MYL5Q02045 173 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 NCAPHQ15003 741 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 RESP18Q5W5W9 173 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 A0A087X0B3 334 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 C6orf229H3BNL8 230 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 CUTAO60888 179 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 CAVIN2O95810 425 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 KRT2P35908 639 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 ATP2B2Q01814 1243 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 HEATR3Q7Z4Q2 680 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 CLEC10AQ8IUN9 316 aa11.39□□□□□ -0.59
SEC16A-204ENST00000313084 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
SEC16A-204ENST00000313084 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
SEC16A-204ENST00000313084 TOM1O60784 492 aa11.38□□□□□ -0.59
SEC16A-204ENST00000313084 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
SEC16A-204ENST00000313084 ERCC3P19447 782 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms