RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TRIM22Q8IYM9 498 aa19.47■□□□□ 0.71
CLCF1-201ENST00000312438 PIM2Q9P1W9 311 aa19.47■□□□□ 0.71
CLCF1-201ENST00000312438 DDAH1O94760 285 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 CDK8P49336 464 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 TROAPQ12815 778 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 KIAA0825Q8IV33 1275 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 CRACR2BQ8N4Y2 399 aaPredicted RBP19.46■□□□□ 0.71
CLCF1-201ENST00000312438 ANKS1AQ92625 1134 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 RBM28Q9NW13 759 aaKnown RBP19.46■□□□□ 0.71
CLCF1-201ENST00000312438 TFIP11Q9UBB9 837 aaKnown RBP19.46■□□□□ 0.71
CLCF1-201ENST00000312438 ELP1O95163 1332 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
CLCF1-201ENST00000312438 NMT2O60551 498 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 WDHD1O75717 1129 aaPredicted RBP19.46■□□□□ 0.71
CLCF1-201ENST00000312438 TSPY3P0CV98 308 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 TSPY8P0CW00 308 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 CDC42EP5Q6NZY7 148 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
CLCF1-201ENST00000312438 MYH2Q9UKX2 1941 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 PICALMQ13492 652 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 IL17RBQ9NRM6 502 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 CHD4Q14839 1912 aa19.45■□□□□ 0.7
CLCF1-201ENST00000312438 RASA1P20936 1047 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 NBPF11Q86T75 865 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
CLCF1-201ENST00000312438 ISY1Q9ULR0 285 aaKnown RBP19.44■□□□□ 0.7
CLCF1-201ENST00000312438 TRIM29Q14134 588 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 SYAP1Q96A49 352 aaPredicted RBP19.44■□□□□ 0.7
CLCF1-201ENST00000312438 KAT14Q9H8E8 782 aa19.44■□□□□ 0.7
CLCF1-201ENST00000312438 GOLGA6L3A6NEY3 463 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 YDJCA8MPS7 323 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 DEXIO95424 95 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 KRT40Q6A162 431 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 LARGE2Q8N3Y3 721 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
CLCF1-201ENST00000312438 AIFM3Q96NN9 605 aa19.43■□□□□ 0.7
CLCF1-201ENST00000312438 DDX4Q9NQI0 724 aaKnown RBP19.43■□□□□ 0.7
CLCF1-201ENST00000312438 RBM5P52756 815 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLCF1-201ENST00000312438 R3HDM1Q15032 1099 aaKnown RBP19.42■□□□□ 0.7
CLCF1-201ENST00000312438 ZSCAN23Q3MJ62 389 aa19.42■□□□□ 0.7
CLCF1-201ENST00000312438 CCDC82Q8N4S0 544 aa19.42■□□□□ 0.7
CLCF1-201ENST00000312438 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
CLCF1-201ENST00000312438 CTCFLQ8NI51 663 aaPredicted RBP19.42■□□□□ 0.7
CLCF1-201ENST00000312438 RNF26Q9BY78 433 aaPredicted RBP19.42■□□□□ 0.7
CLCF1-201ENST00000312438 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
CLCF1-201ENST00000312438 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
CLCF1-201ENST00000312438 TMEM63CQ9P1W3 806 aa19.42■□□□□ 0.7
CLCF1-201ENST00000312438 FSD2A1L4K1 749 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 ZNF445P59923 1031 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 AKAP17AQ02040 695 aaKnown RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 MAP3K14Q99558 947 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 ZNF277Q9NRM2 450 aaPredicted RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 MYO3BQ8WXR4 1341 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 GABPAQ06546 454 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 ILDR1Q86SU0 546 aaPredicted RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 CMTR1Q8N1G2 835 aaKnown RBP19.41■□□□□ 0.7
CLCF1-201ENST00000312438 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
CLCF1-201ENST00000312438 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
CLCF1-201ENST00000312438 PRPF3O43395 683 aaKnown RBP19.4■□□□□ 0.7
CLCF1-201ENST00000312438 KIF5BP33176 963 aa19.4■□□□□ 0.7
CLCF1-201ENST00000312438 L1TD1Q5T7N2 865 aaKnown RBP19.4■□□□□ 0.7
CLCF1-201ENST00000312438 IDI2Q9BXS1 227 aa19.4■□□□□ 0.7
CLCF1-201ENST00000312438 SWAP70Q9UH65 585 aa19.4■□□□□ 0.7
CLCF1-201ENST00000312438 LAMB1P07942 1786 aa19.4■□□□□ 0.7
CLCF1-201ENST00000312438 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.7
CLCF1-201ENST00000312438 HLA-DOAP06340 250 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 VIL1P09327 827 aaKnown RBP19.39■□□□□ 0.7
CLCF1-201ENST00000312438 GUCY1A2P33402 732 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 FUT2Q10981 343 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 TMTC3Q6ZXV5 915 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 PNMA1Q8ND90 353 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 SERPINB13Q9UIV8 391 aa19.39■□□□□ 0.7
CLCF1-201ENST00000312438 RSBN1LQ6PCB5 846 aaPredicted RBP19.39■□□□□ 0.69
CLCF1-201ENST00000312438 UPF1Q92900 1129 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLCF1-201ENST00000312438 DHX36Q9H2U1 1008 aaKnown RBP19.39■□□□□ 0.69
CLCF1-201ENST00000312438 CD2APQ9Y5K6 639 aa19.39■□□□□ 0.69
CLCF1-201ENST00000312438 UBE2Q2LH0YL09 131 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 XBP1P17861 261 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 NFIAQ12857 509 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 USP28Q96RU2 1077 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 RTEL1Q9NZ71 1219 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 ZNRF3Q9ULT6 936 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 STX8Q9UNK0 236 aa19.38■□□□□ 0.69
CLCF1-201ENST00000312438 V9GY48 417 aaPredicted RBP19.38■□□□□ 0.69
CLCF1-201ENST00000312438 PLEKHA8P1O95397 391 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 U2AF2P26368 475 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 GNAQP50148 359 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 GNL2Q13823 731 aaKnown RBP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 SAFBQ15424 915 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLCF1-201ENST00000312438 MYSM1Q5VVJ2 828 aa19.37■□□□□ 0.69
CLCF1-201ENST00000312438 SGIP1Q9BQI5 828 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms