RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 MKNK2Q9HBH9 465 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 KCNQ5Q9NR82 932 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 BAG3O95817 575 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 MMP1P03956 469 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 IL1R1P14778 569 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 RXRBP28702 533 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 AKAP17AQ02040 695 aaKnown RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 PDE4BQ07343 736 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 SPC24Q8NBT2 197 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 DEXIO95424 95 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 U2AF2P26368 475 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCG2-201ENST00000305409 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 SCNN1DP51172 638 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 GRIN1Q05586 938 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 PKN1Q16512 942 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
SCG2-201ENST00000305409 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
SCG2-201ENST00000305409 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
SCG2-201ENST00000305409 BIN1O00499 593 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PLSCR1O15162 318 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 ORC4O43929 436 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 YEATS4O95619 227 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
SCG2-201ENST00000305409 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 FUT2Q10981 343 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PICALMQ13492 652 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
SCG2-201ENST00000305409 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 GSTO1P78417 241 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PTPAQ15257 358 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCG2-201ENST00000305409 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
SCG2-201ENST00000305409 PFKFB1P16118 471 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 ZNF165P49910 485 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
SCG2-201ENST00000305409 ZSCAN30Q86W11 494 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 CERS5Q8N5B7 392 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 WASF1Q92558 559 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 ZC3H12CQ9C0D7 883 aaKnown RBP13.15□□□□□ -0.3
SCG2-201ENST00000305409 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
SCG2-201ENST00000305409 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 ZNF202O95125 648 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 CHRNA5P30532 468 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
SCG2-201ENST00000305409 SHC4Q6S5L8 630 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
SCG2-201ENST00000305409 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
SCG2-201ENST00000305409 WNT7AO00755 349 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 LDHCP07864 332 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 EZH2Q15910 746 aaKnown RBP13.14□□□□□ -0.31
SCG2-201ENST00000305409 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
SCG2-201ENST00000305409 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 MSNP26038 577 aaKnown RBP13.14□□□□□ -0.31
SCG2-201ENST00000305409 RHBDL3P58872 404 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 PPP4CP60510 307 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
SCG2-201ENST00000305409 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
SCG2-201ENST00000305409 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
SCG2-201ENST00000305409 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 G3V3G9 751 aa13.13□□□□□ -0.31
SCG2-201ENST00000305409 NPR1P16066 1061 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms